Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf2Q8BZT2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Sh3rf2Q8BZT2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf2Q8BZT2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf2Q8BZT2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf2Q8BZT2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf2Q8BZT2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf2Q8BZT2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf2Q8BZT2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf2Q8BZT2 Iqck-206ENSMUST00000208658 2891 ntBASIC18.87■□□□□ 0.61
Sh3rf2Q8BZT2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf2Q8BZT2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf2Q8BZT2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf2Q8BZT2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3rf2Q8BZT2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf2Q8BZT2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf2Q8BZT2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf2Q8BZT2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf2Q8BZT2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Sh3rf2Q8BZT2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.85■□□□□ 0.61
Sh3rf2Q8BZT2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.85■□□□□ 0.61
Sh3rf2Q8BZT2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sh3rf2Q8BZT2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.85■□□□□ 0.61
Sh3rf2Q8BZT2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Sh3rf2Q8BZT2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf2Q8BZT2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sh3rf2Q8BZT2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3rf2Q8BZT2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Gm10252-201ENSMUST00000209541 832 ntBASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3rf2Q8BZT2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3rf2Q8BZT2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3rf2Q8BZT2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3rf2Q8BZT2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3rf2Q8BZT2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3rf2Q8BZT2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3rf2Q8BZT2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3rf2Q8BZT2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Sh3rf2Q8BZT2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.83■□□□□ 0.6
Sh3rf2Q8BZT2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.82■□□□□ 0.6
Sh3rf2Q8BZT2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3rf2Q8BZT2 Gm2399-201ENSMUST00000104944 225 ntBASIC18.82■□□□□ 0.6
Sh3rf2Q8BZT2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3rf2Q8BZT2 Gm11249-201ENSMUST00000117071 859 ntBASIC18.82■□□□□ 0.6
Sh3rf2Q8BZT2 Gm5643-201ENSMUST00000117081 966 ntBASIC18.82■□□□□ 0.6
Sh3rf2Q8BZT2 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.82■□□□□ 0.6
Sh3rf2Q8BZT2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3rf2Q8BZT2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3rf2Q8BZT2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3rf2Q8BZT2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3rf2Q8BZT2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3rf2Q8BZT2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3rf2Q8BZT2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3rf2Q8BZT2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms