Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm11Q8BUV6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm11Q8BUV6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm11Q8BUV6 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.79■□□□□ 0.12
Lsm11Q8BUV6 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.79■□□□□ 0.12
Lsm11Q8BUV6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm11Q8BUV6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm11Q8BUV6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lsm11Q8BUV6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm11Q8BUV6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Lsm11Q8BUV6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm11Q8BUV6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm11Q8BUV6 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.78■□□□□ 0.12
Lsm11Q8BUV6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm11Q8BUV6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm11Q8BUV6 Gm45102-201ENSMUST00000207427 857 ntBASIC15.78■□□□□ 0.12
Lsm11Q8BUV6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm11Q8BUV6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm11Q8BUV6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Lsm11Q8BUV6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lsm11Q8BUV6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.77■□□□□ 0.12
Lsm11Q8BUV6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
Lsm11Q8BUV6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.77■□□□□ 0.11
Lsm11Q8BUV6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm11Q8BUV6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Lsm11Q8BUV6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Gm42790-201ENSMUST00000201268 969 ntBASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Lsm11Q8BUV6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Spcs1-204ENSMUST00000226782 949 ntBASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Lsm11Q8BUV6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm11Q8BUV6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm11Q8BUV6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm11Q8BUV6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
Lsm11Q8BUV6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm11Q8BUV6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm11Q8BUV6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Lsm11Q8BUV6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm11Q8BUV6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm11Q8BUV6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.74■□□□□ 0.11
Lsm11Q8BUV6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.74■□□□□ 0.11
Lsm11Q8BUV6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm11Q8BUV6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Lsm11Q8BUV6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms