Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp43Q8BUM9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.88■□□□□ 0.61
Usp43Q8BUM9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Usp43Q8BUM9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.88■□□□□ 0.61
Usp43Q8BUM9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usp43Q8BUM9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp43Q8BUM9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp43Q8BUM9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp43Q8BUM9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp43Q8BUM9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp43Q8BUM9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Usp43Q8BUM9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp43Q8BUM9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp43Q8BUM9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp43Q8BUM9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp43Q8BUM9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp43Q8BUM9 AV356131-201ENSMUST00000206201 750 ntBASIC18.87■□□□□ 0.61
Usp43Q8BUM9 Gm7514-201ENSMUST00000209475 934 ntBASIC18.87■□□□□ 0.61
Usp43Q8BUM9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp43Q8BUM9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp43Q8BUM9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp43Q8BUM9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp43Q8BUM9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp43Q8BUM9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp43Q8BUM9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp43Q8BUM9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.86■□□□□ 0.61
Usp43Q8BUM9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp43Q8BUM9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Usp43Q8BUM9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp43Q8BUM9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp43Q8BUM9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp43Q8BUM9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp43Q8BUM9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp43Q8BUM9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Usp43Q8BUM9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp43Q8BUM9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp43Q8BUM9 Gm8495-201ENSMUST00000188740 694 ntBASIC18.85■□□□□ 0.61
Usp43Q8BUM9 Gm6420-201ENSMUST00000193885 723 ntBASIC18.85■□□□□ 0.61
Usp43Q8BUM9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp43Q8BUM9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.85■□□□□ 0.61
Usp43Q8BUM9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp43Q8BUM9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Usp43Q8BUM9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Usp43Q8BUM9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp43Q8BUM9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp43Q8BUM9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp43Q8BUM9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Gm10849-201ENSMUST00000100397 618 ntBASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Gm26571-201ENSMUST00000181399 666 ntBASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Usp43Q8BUM9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp43Q8BUM9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp43Q8BUM9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp43Q8BUM9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.83■□□□□ 0.6
Usp43Q8BUM9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp43Q8BUM9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Usp43Q8BUM9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp43Q8BUM9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp43Q8BUM9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp43Q8BUM9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp43Q8BUM9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp43Q8BUM9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp43Q8BUM9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.82■□□□□ 0.6
Usp43Q8BUM9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp43Q8BUM9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp43Q8BUM9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp43Q8BUM9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp43Q8BUM9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp43Q8BUM9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp43Q8BUM9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp43Q8BUM9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp43Q8BUM9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp43Q8BUM9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp43Q8BUM9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Usp43Q8BUM9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp43Q8BUM9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Usp43Q8BUM9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp43Q8BUM9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp43Q8BUM9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Usp43Q8BUM9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Usp43Q8BUM9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp43Q8BUM9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp43Q8BUM9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp43Q8BUM9 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.8■□□□□ 0.6
Usp43Q8BUM9 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.8■□□□□ 0.6
Usp43Q8BUM9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp43Q8BUM9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Usp43Q8BUM9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp43Q8BUM9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms