Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nup54Q8BTS4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Nup54Q8BTS4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Nup54Q8BTS4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup54Q8BTS4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup54Q8BTS4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Nup54Q8BTS4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.07■□□□□ 0.64
Nup54Q8BTS4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup54Q8BTS4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nup54Q8BTS4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Nup54Q8BTS4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup54Q8BTS4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Nup54Q8BTS4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup54Q8BTS4 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.07■□□□□ 0.64
Nup54Q8BTS4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Nup54Q8BTS4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup54Q8BTS4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup54Q8BTS4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nup54Q8BTS4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.04■□□□□ 0.64
Nup54Q8BTS4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup54Q8BTS4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nup54Q8BTS4 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.04■□□□□ 0.64
Nup54Q8BTS4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Nup54Q8BTS4 Gm4968-201ENSMUST00000071458 858 ntBASIC19.04■□□□□ 0.64
Nup54Q8BTS4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup54Q8BTS4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup54Q8BTS4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup54Q8BTS4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup54Q8BTS4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.03■□□□□ 0.64
Nup54Q8BTS4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nup54Q8BTS4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Nup54Q8BTS4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.03■□□□□ 0.64
Nup54Q8BTS4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup54Q8BTS4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup54Q8BTS4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup54Q8BTS4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nup54Q8BTS4 Gm26524-201ENSMUST00000192339 390 ntBASIC19.03■□□□□ 0.64
Nup54Q8BTS4 Gm5408-201ENSMUST00000197998 747 ntBASIC19.03■□□□□ 0.64
Nup54Q8BTS4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.03■□□□□ 0.64
Nup54Q8BTS4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nup54Q8BTS4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nup54Q8BTS4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nup54Q8BTS4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nup54Q8BTS4 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.02■□□□□ 0.64
Nup54Q8BTS4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Nup54Q8BTS4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nup54Q8BTS4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.02■□□□□ 0.64
Nup54Q8BTS4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.02■□□□□ 0.64
Nup54Q8BTS4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.02■□□□□ 0.64
Nup54Q8BTS4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.02■□□□□ 0.64
Nup54Q8BTS4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Nup54Q8BTS4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Nup54Q8BTS4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.02■□□□□ 0.64
Nup54Q8BTS4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.02■□□□□ 0.64
Nup54Q8BTS4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nup54Q8BTS4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nup54Q8BTS4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nup54Q8BTS4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Nup54Q8BTS4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nup54Q8BTS4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.01■□□□□ 0.63
Nup54Q8BTS4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nup54Q8BTS4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nup54Q8BTS4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nup54Q8BTS4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nup54Q8BTS4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.01■□□□□ 0.63
Nup54Q8BTS4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nup54Q8BTS4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms