Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Gm6420-201ENSMUST00000193885 723 ntBASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Nespas-201ENSMUST00000143738 1083 ntBASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trpa1Q8BLA8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trpa1Q8BLA8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpa1Q8BLA8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpa1Q8BLA8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Trpa1Q8BLA8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpa1Q8BLA8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.45■□□□□ 0.7
Trpa1Q8BLA8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.45■□□□□ 0.7
Trpa1Q8BLA8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpa1Q8BLA8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpa1Q8BLA8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpa1Q8BLA8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trpa1Q8BLA8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpa1Q8BLA8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpa1Q8BLA8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpa1Q8BLA8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trpa1Q8BLA8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpa1Q8BLA8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trpa1Q8BLA8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpa1Q8BLA8 Gm29257-201ENSMUST00000186115 639 ntBASIC19.44■□□□□ 0.7
Trpa1Q8BLA8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpa1Q8BLA8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpa1Q8BLA8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trpa1Q8BLA8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpa1Q8BLA8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpa1Q8BLA8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpa1Q8BLA8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpa1Q8BLA8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Trpa1Q8BLA8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Trpa1Q8BLA8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.42■□□□□ 0.7
Trpa1Q8BLA8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpa1Q8BLA8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpa1Q8BLA8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpa1Q8BLA8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.42■□□□□ 0.7
Trpa1Q8BLA8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpa1Q8BLA8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpa1Q8BLA8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Trpa1Q8BLA8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpa1Q8BLA8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpa1Q8BLA8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpa1Q8BLA8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.41■□□□□ 0.7
Trpa1Q8BLA8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpa1Q8BLA8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trpa1Q8BLA8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms