Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clrn3Q8BHH8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Gm42778-201ENSMUST00000199644 553 ntBASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Clrn3Q8BHH8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Clrn3Q8BHH8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Gm15039-201ENSMUST00000118914 875 ntBASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Gm13234-201ENSMUST00000120010 747 ntBASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.39■□□□□ 0.37
Clrn3Q8BHH8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 Gm38205-201ENSMUST00000192243 258 ntBASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clrn3Q8BHH8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Reep4-203ENSMUST00000226563 1444 ntBASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clrn3Q8BHH8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Gm13146-201ENSMUST00000118508 780 ntBASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Gm18284-201ENSMUST00000172604 624 ntBASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Gm5874-201ENSMUST00000096101 508 ntBASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clrn3Q8BHH8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clrn3Q8BHH8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms