Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Depdc1bQ8BH88 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Depdc1bQ8BH88 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Depdc1bQ8BH88 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Depdc1bQ8BH88 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Depdc1bQ8BH88 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Depdc1bQ8BH88 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Depdc1bQ8BH88 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Depdc1bQ8BH88 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Depdc1bQ8BH88 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.18■□□□□ 0.82
Depdc1bQ8BH88 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Depdc1bQ8BH88 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.18■□□□□ 0.82
Depdc1bQ8BH88 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Depdc1bQ8BH88 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.18■□□□□ 0.82
Depdc1bQ8BH88 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.18■□□□□ 0.82
Depdc1bQ8BH88 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Depdc1bQ8BH88 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Depdc1bQ8BH88 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Depdc1bQ8BH88 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Depdc1bQ8BH88 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Depdc1bQ8BH88 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Depdc1bQ8BH88 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Depdc1bQ8BH88 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1bQ8BH88 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Depdc1bQ8BH88 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1bQ8BH88 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1bQ8BH88 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1bQ8BH88 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1bQ8BH88 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1bQ8BH88 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1bQ8BH88 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1bQ8BH88 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Depdc1bQ8BH88 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Gm12933-201ENSMUST00000120203 872 ntBASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Depdc1bQ8BH88 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Depdc1bQ8BH88 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Depdc1bQ8BH88 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Depdc1bQ8BH88 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Depdc1bQ8BH88 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms