Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc5a7Q8BGY9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Slc5a7Q8BGY9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Slc5a7Q8BGY9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc5a7Q8BGY9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc5a7Q8BGY9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc5a7Q8BGY9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc5a7Q8BGY9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc5a7Q8BGY9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc5a7Q8BGY9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc5a7Q8BGY9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.28■□□□□ 0.2
Slc5a7Q8BGY9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc5a7Q8BGY9 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.28■□□□□ 0.2
Slc5a7Q8BGY9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Slc5a7Q8BGY9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc5a7Q8BGY9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc5a7Q8BGY9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc5a7Q8BGY9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc5a7Q8BGY9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc5a7Q8BGY9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Slc5a7Q8BGY9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc5a7Q8BGY9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc5a7Q8BGY9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc5a7Q8BGY9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc5a7Q8BGY9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc5a7Q8BGY9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc5a7Q8BGY9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Slc5a7Q8BGY9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc5a7Q8BGY9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc5a7Q8BGY9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc5a7Q8BGY9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc5a7Q8BGY9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.25■□□□□ 0.19
Slc5a7Q8BGY9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.25■□□□□ 0.19
Slc5a7Q8BGY9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.25■□□□□ 0.19
Slc5a7Q8BGY9 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms