Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Samm50Q8BGH2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Samm50Q8BGH2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Samm50Q8BGH2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Samm50Q8BGH2 Gm42569-201ENSMUST00000200539 472 ntBASIC21.73■■□□□ 1.07
Samm50Q8BGH2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Samm50Q8BGH2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Samm50Q8BGH2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Samm50Q8BGH2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Samm50Q8BGH2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Samm50Q8BGH2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Samm50Q8BGH2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Samm50Q8BGH2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Samm50Q8BGH2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.71■■□□□ 1.07
Samm50Q8BGH2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Samm50Q8BGH2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Samm50Q8BGH2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Samm50Q8BGH2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Samm50Q8BGH2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Samm50Q8BGH2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Samm50Q8BGH2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Samm50Q8BGH2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Samm50Q8BGH2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Gm26571-201ENSMUST00000181399 666 ntBASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.7■■□□□ 1.06
Samm50Q8BGH2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Samm50Q8BGH2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.7■■□□□ 1.06
Samm50Q8BGH2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Samm50Q8BGH2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Reep4-203ENSMUST00000226563 1444 ntBASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Samm50Q8BGH2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Samm50Q8BGH2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Samm50Q8BGH2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms