Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk3bQ80YF6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Upk3bQ80YF6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.72■□□□□ 0.11
Upk3bQ80YF6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Upk3bQ80YF6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk3bQ80YF6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk3bQ80YF6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Upk3bQ80YF6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk3bQ80YF6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk3bQ80YF6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Upk3bQ80YF6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk3bQ80YF6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Upk3bQ80YF6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Upk3bQ80YF6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk3bQ80YF6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Upk3bQ80YF6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.71■□□□□ 0.1
Upk3bQ80YF6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Upk3bQ80YF6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Upk3bQ80YF6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Rarb-207ENSMUST00000225921 2756 ntBASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk3bQ80YF6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Gm7860-201ENSMUST00000121190 879 ntBASIC15.69■□□□□ 0.1
Upk3bQ80YF6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk3bQ80YF6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bQ80YF6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bQ80YF6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bQ80YF6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.68■□□□□ 0.1
Upk3bQ80YF6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.68■□□□□ 0.1
Upk3bQ80YF6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk3bQ80YF6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms