Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
Ccdc116Q80X53 Gm9988-201ENSMUST00000069786 435 ntBASIC18.23■□□□□ 0.51
Ccdc116Q80X53 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc116Q80X53 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc116Q80X53 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc116Q80X53 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc116Q80X53 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc116Q80X53 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.23■□□□□ 0.51
Ccdc116Q80X53 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc116Q80X53 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.21■□□□□ 0.51
Ccdc116Q80X53 Grk6-206ENSMUST00000224995 2971 ntBASIC18.21■□□□□ 0.5
Ccdc116Q80X53 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.5
Ccdc116Q80X53 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.2■□□□□ 0.5
Ccdc116Q80X53 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc116Q80X53 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc116Q80X53 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc116Q80X53 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc116Q80X53 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc116Q80X53 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc116Q80X53 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccdc116Q80X53 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc116Q80X53 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.19■□□□□ 0.5
Ccdc116Q80X53 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc116Q80X53 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc116Q80X53 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc116Q80X53 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc116Q80X53 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc116Q80X53 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc116Q80X53 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc116Q80X53 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc116Q80X53 Gm13534-201ENSMUST00000121169 513 ntBASIC18.17■□□□□ 0.5
Ccdc116Q80X53 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.17■□□□□ 0.5
Ccdc116Q80X53 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.17■□□□□ 0.5
Ccdc116Q80X53 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc116Q80X53 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc116Q80X53 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms