Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk1Q80X41 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vrk1Q80X41 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vrk1Q80X41 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vrk1Q80X41 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vrk1Q80X41 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vrk1Q80X41 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Vrk1Q80X41 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vrk1Q80X41 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Vrk1Q80X41 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.71■□□□□ 0.43
Vrk1Q80X41 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vrk1Q80X41 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vrk1Q80X41 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vrk1Q80X41 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vrk1Q80X41 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
Vrk1Q80X41 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vrk1Q80X41 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vrk1Q80X41 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Vrk1Q80X41 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Vrk1Q80X41 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.7■□□□□ 0.42
Vrk1Q80X41 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Vrk1Q80X41 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vrk1Q80X41 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.7■□□□□ 0.42
Vrk1Q80X41 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vrk1Q80X41 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vrk1Q80X41 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.69■□□□□ 0.42
Vrk1Q80X41 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.69■□□□□ 0.42
Vrk1Q80X41 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.69■□□□□ 0.42
Vrk1Q80X41 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vrk1Q80X41 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vrk1Q80X41 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vrk1Q80X41 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vrk1Q80X41 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vrk1Q80X41 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vrk1Q80X41 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vrk1Q80X41 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Vrk1Q80X41 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vrk1Q80X41 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk1Q80X41 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk1Q80X41 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk1Q80X41 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk1Q80X41 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.68■□□□□ 0.42
Vrk1Q80X41 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk1Q80X41 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk1Q80X41 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.68■□□□□ 0.42
Vrk1Q80X41 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vrk1Q80X41 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Vrk1Q80X41 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vrk1Q80X41 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vrk1Q80X41 Gm11249-201ENSMUST00000117071 859 ntBASIC17.67■□□□□ 0.42
Vrk1Q80X41 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vrk1Q80X41 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.67■□□□□ 0.42
Vrk1Q80X41 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.67■□□□□ 0.42
Vrk1Q80X41 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vrk1Q80X41 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vrk1Q80X41 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.67■□□□□ 0.42
Vrk1Q80X41 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.67■□□□□ 0.42
Vrk1Q80X41 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Vrk1Q80X41 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Gm6576-201ENSMUST00000169678 883 ntBASIC17.66■□□□□ 0.42
Vrk1Q80X41 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.66■□□□□ 0.42
Vrk1Q80X41 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.66■□□□□ 0.42
Vrk1Q80X41 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms