Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Usp8Q80U87 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Usp8Q80U87 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp8Q80U87 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Usp8Q80U87 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp8Q80U87 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp8Q80U87 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp8Q80U87 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp8Q80U87 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.6■□□□□ 0.57
Usp8Q80U87 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp8Q80U87 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp8Q80U87 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.6■□□□□ 0.57
Usp8Q80U87 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp8Q80U87 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp8Q80U87 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Usp8Q80U87 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp8Q80U87 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.6■□□□□ 0.57
Usp8Q80U87 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Usp8Q80U87 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Usp8Q80U87 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp8Q80U87 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp8Q80U87 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp8Q80U87 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Usp8Q80U87 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp8Q80U87 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Usp8Q80U87 Gm26833-201ENSMUST00000180899 440 ntBASIC18.59■□□□□ 0.57
Usp8Q80U87 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp8Q80U87 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp8Q80U87 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp8Q80U87 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp8Q80U87 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp8Q80U87 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp8Q80U87 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp8Q80U87 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp8Q80U87 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Usp8Q80U87 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp8Q80U87 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp8Q80U87 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp8Q80U87 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Usp8Q80U87 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp8Q80U87 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp8Q80U87 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp8Q80U87 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp8Q80U87 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp8Q80U87 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.58■□□□□ 0.56
Usp8Q80U87 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.58■□□□□ 0.56
Usp8Q80U87 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp8Q80U87 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Usp8Q80U87 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp8Q80U87 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp8Q80U87 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Usp8Q80U87 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Usp8Q80U87 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Usp8Q80U87 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Usp8Q80U87 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Usp8Q80U87 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Usp8Q80U87 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp8Q80U87 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp8Q80U87 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Usp8Q80U87 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp8Q80U87 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp8Q80U87 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Usp8Q80U87 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Usp8Q80U87 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp8Q80U87 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp8Q80U87 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp8Q80U87 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Usp8Q80U87 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp8Q80U87 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp8Q80U87 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp8Q80U87 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp8Q80U87 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp8Q80U87 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp8Q80U87 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.56■□□□□ 0.56
Usp8Q80U87 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp8Q80U87 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.56■□□□□ 0.56
Usp8Q80U87 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp8Q80U87 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp8Q80U87 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.56■□□□□ 0.56
Usp8Q80U87 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp8Q80U87 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp8Q80U87 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Usp8Q80U87 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp8Q80U87 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp8Q80U87 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp8Q80U87 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp8Q80U87 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp8Q80U87 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.55■□□□□ 0.56
Usp8Q80U87 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.55■□□□□ 0.56
Usp8Q80U87 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp8Q80U87 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp8Q80U87 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp8Q80U87 BC021767-201ENSMUST00000126387 1716 ntBASIC18.55■□□□□ 0.56
Usp8Q80U87 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp8Q80U87 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp8Q80U87 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Usp8Q80U87 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Usp8Q80U87 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp8Q80U87 Gm43017-201ENSMUST00000198296 752 ntBASIC18.55■□□□□ 0.56
Usp8Q80U87 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms