Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pif1Q80SX8 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.11■□□□□ 0.33
Pif1Q80SX8 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.11■□□□□ 0.33
Pif1Q80SX8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pif1Q80SX8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pif1Q80SX8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pif1Q80SX8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pif1Q80SX8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.1■□□□□ 0.33
Pif1Q80SX8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.1■□□□□ 0.33
Pif1Q80SX8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pif1Q80SX8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Gm6576-201ENSMUST00000169678 883 ntBASIC17.09■□□□□ 0.33
Pif1Q80SX8 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.09■□□□□ 0.33
Pif1Q80SX8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Gm44549-201ENSMUST00000208351 577 ntBASIC17.09■□□□□ 0.33
Pif1Q80SX8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pif1Q80SX8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Pif1Q80SX8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pif1Q80SX8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pif1Q80SX8 Gm22325-201ENSMUST00000158904 308 ntBASIC17.08■□□□□ 0.32
Pif1Q80SX8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.08■□□□□ 0.32
Pif1Q80SX8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pif1Q80SX8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pif1Q80SX8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.07■□□□□ 0.32
Pif1Q80SX8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pif1Q80SX8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pif1Q80SX8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pif1Q80SX8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pif1Q80SX8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pif1Q80SX8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pif1Q80SX8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pif1Q80SX8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pif1Q80SX8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Pif1Q80SX8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pif1Q80SX8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pif1Q80SX8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pif1Q80SX8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.06■□□□□ 0.32
Pif1Q80SX8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pif1Q80SX8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pif1Q80SX8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pif1Q80SX8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pif1Q80SX8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pif1Q80SX8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pif1Q80SX8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pif1Q80SX8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pif1Q80SX8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pif1Q80SX8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Pif1Q80SX8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pif1Q80SX8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pif1Q80SX8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pif1Q80SX8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms