Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.33■□□□□ 0.52
Pcdh8Q7TSK3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh8Q7TSK3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdh8Q7TSK3 Gm20049-201ENSMUST00000219950 730 ntBASIC18.33■□□□□ 0.52
Pcdh8Q7TSK3 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.33■□□□□ 0.52
Pcdh8Q7TSK3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pcdh8Q7TSK3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pcdh8Q7TSK3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh8Q7TSK3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh8Q7TSK3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh8Q7TSK3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdh8Q7TSK3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Gm22240-201ENSMUST00000175225 82 ntBASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh8Q7TSK3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Gm8520-201ENSMUST00000186517 868 ntBASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Rab3c-203ENSMUST00000224180 967 ntBASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh8Q7TSK3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdh8Q7TSK3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 Gm26524-201ENSMUST00000192339 390 ntBASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdh8Q7TSK3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh8Q7TSK3 Golph3-205ENSMUST00000228671 2842 ntBASIC18.27■□□□□ 0.52
Pcdh8Q7TSK3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh8Q7TSK3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh8Q7TSK3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh8Q7TSK3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.27■□□□□ 0.52
Pcdh8Q7TSK3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh8Q7TSK3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh8Q7TSK3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms