Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn10aQ6QIY3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn10aQ6QIY3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn10aQ6QIY3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Scn10aQ6QIY3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn10aQ6QIY3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.37■■□□□ 1.01
Scn10aQ6QIY3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Scn10aQ6QIY3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.37■■□□□ 1.01
Scn10aQ6QIY3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn10aQ6QIY3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scn10aQ6QIY3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.37■■□□□ 1.01
Scn10aQ6QIY3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.37■■□□□ 1.01
Scn10aQ6QIY3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.37■■□□□ 1.01
Scn10aQ6QIY3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scn10aQ6QIY3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.36■■□□□ 1.01
Scn10aQ6QIY3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn10aQ6QIY3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.36■■□□□ 1.01
Scn10aQ6QIY3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Scn10aQ6QIY3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Scn10aQ6QIY3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Scn10aQ6QIY3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.36■■□□□ 1.01
Scn10aQ6QIY3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn10aQ6QIY3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn10aQ6QIY3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn10aQ6QIY3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scn10aQ6QIY3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn10aQ6QIY3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scn10aQ6QIY3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.35■■□□□ 1.01
Scn10aQ6QIY3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn10aQ6QIY3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scn10aQ6QIY3 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.35■■□□□ 1.01
Scn10aQ6QIY3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn10aQ6QIY3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn10aQ6QIY3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.34■■□□□ 1.01
Scn10aQ6QIY3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Scn10aQ6QIY3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Scn10aQ6QIY3 Gm38285-201ENSMUST00000192928 922 ntBASIC21.34■■□□□ 1.01
Scn10aQ6QIY3 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.34■■□□□ 1.01
Scn10aQ6QIY3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.34■■□□□ 1.01
Scn10aQ6QIY3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.34■■□□□ 1.01
Scn10aQ6QIY3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn10aQ6QIY3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn10aQ6QIY3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Scn10aQ6QIY3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.33■■□□□ 1.01
Scn10aQ6QIY3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.33■■□□□ 1.01
Scn10aQ6QIY3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scn10aQ6QIY3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scn10aQ6QIY3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.33■■□□□ 1
Scn10aQ6QIY3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scn10aQ6QIY3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Scn10aQ6QIY3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn10aQ6QIY3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.32■■□□□ 1
Scn10aQ6QIY3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.32■■□□□ 1
Scn10aQ6QIY3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn10aQ6QIY3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn10aQ6QIY3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.32■■□□□ 1
Scn10aQ6QIY3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.32■■□□□ 1
Scn10aQ6QIY3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Scn10aQ6QIY3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scn10aQ6QIY3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.31■■□□□ 1
Scn10aQ6QIY3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Scn10aQ6QIY3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn10aQ6QIY3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn10aQ6QIY3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn10aQ6QIY3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn10aQ6QIY3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scn10aQ6QIY3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scn10aQ6QIY3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Scn10aQ6QIY3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scn10aQ6QIY3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Scn10aQ6QIY3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn10aQ6QIY3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Scn10aQ6QIY3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Scn10aQ6QIY3 Gm21362-201ENSMUST00000194272 928 ntBASIC21.3■■□□□ 1
Scn10aQ6QIY3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Scn10aQ6QIY3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn10aQ6QIY3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.3■■□□□ 1
Scn10aQ6QIY3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.3■■□□□ 1
Scn10aQ6QIY3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.3■■□□□ 1
Scn10aQ6QIY3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.3■■□□□ 1
Scn10aQ6QIY3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn10aQ6QIY3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn10aQ6QIY3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn10aQ6QIY3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Scn10aQ6QIY3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.3■■□□□ 1
Scn10aQ6QIY3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Scn10aQ6QIY3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.29■■□□□ 1
Scn10aQ6QIY3 Gm18032-201ENSMUST00000222541 538 ntBASIC21.29■■□□□ 1
Scn10aQ6QIY3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scn10aQ6QIY3 Gm7367-201ENSMUST00000057611 492 ntBASIC21.29■■□□□ 1
Scn10aQ6QIY3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn10aQ6QIY3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn10aQ6QIY3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scn10aQ6QIY3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Scn10aQ6QIY3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scn10aQ6QIY3 Mir6349-201ENSMUST00000184059 97 ntBASIC21.28■■□□□ 1
Scn10aQ6QIY3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn10aQ6QIY3 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.28■■□□□ 1
Scn10aQ6QIY3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scn10aQ6QIY3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms