Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NfrkbQ6PIJ4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NfrkbQ6PIJ4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NfrkbQ6PIJ4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NfrkbQ6PIJ4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NfrkbQ6PIJ4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NfrkbQ6PIJ4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NfrkbQ6PIJ4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NfrkbQ6PIJ4 Gm44549-201ENSMUST00000208351 577 ntBASIC20.97■□□□□ 0.95
NfrkbQ6PIJ4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NfrkbQ6PIJ4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NfrkbQ6PIJ4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NfrkbQ6PIJ4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NfrkbQ6PIJ4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NfrkbQ6PIJ4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
NfrkbQ6PIJ4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NfrkbQ6PIJ4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.96■□□□□ 0.95
NfrkbQ6PIJ4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NfrkbQ6PIJ4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NfrkbQ6PIJ4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NfrkbQ6PIJ4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NfrkbQ6PIJ4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NfrkbQ6PIJ4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NfrkbQ6PIJ4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.96■□□□□ 0.95
NfrkbQ6PIJ4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.96■□□□□ 0.95
NfrkbQ6PIJ4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NfrkbQ6PIJ4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NfrkbQ6PIJ4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NfrkbQ6PIJ4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
NfrkbQ6PIJ4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NfrkbQ6PIJ4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
NfrkbQ6PIJ4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
NfrkbQ6PIJ4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NfrkbQ6PIJ4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NfrkbQ6PIJ4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NfrkbQ6PIJ4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NfrkbQ6PIJ4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NfrkbQ6PIJ4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NfrkbQ6PIJ4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.94■□□□□ 0.94
NfrkbQ6PIJ4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.94■□□□□ 0.94
NfrkbQ6PIJ4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NfrkbQ6PIJ4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NfrkbQ6PIJ4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NfrkbQ6PIJ4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NfrkbQ6PIJ4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 Gm6576-201ENSMUST00000169678 883 ntBASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NfrkbQ6PIJ4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NfrkbQ6PIJ4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NfrkbQ6PIJ4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NfrkbQ6PIJ4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NfrkbQ6PIJ4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NfrkbQ6PIJ4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NfrkbQ6PIJ4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.92■□□□□ 0.94
NfrkbQ6PIJ4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NfrkbQ6PIJ4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NfrkbQ6PIJ4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.92■□□□□ 0.94
NfrkbQ6PIJ4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NfrkbQ6PIJ4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NfrkbQ6PIJ4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NfrkbQ6PIJ4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NfrkbQ6PIJ4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NfrkbQ6PIJ4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NfrkbQ6PIJ4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NfrkbQ6PIJ4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NfrkbQ6PIJ4 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.9■□□□□ 0.94
NfrkbQ6PIJ4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NfrkbQ6PIJ4 Gm11249-201ENSMUST00000117071 859 ntBASIC20.9■□□□□ 0.94
NfrkbQ6PIJ4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.9■□□□□ 0.94
NfrkbQ6PIJ4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.9■□□□□ 0.94
NfrkbQ6PIJ4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.9■□□□□ 0.94
NfrkbQ6PIJ4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NfrkbQ6PIJ4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NfrkbQ6PIJ4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NfrkbQ6PIJ4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NfrkbQ6PIJ4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms