Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dhx40Q6PE54 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dhx40Q6PE54 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.67■□□□□ 0.9
Dhx40Q6PE54 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dhx40Q6PE54 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dhx40Q6PE54 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dhx40Q6PE54 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dhx40Q6PE54 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dhx40Q6PE54 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Dhx40Q6PE54 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Dhx40Q6PE54 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.66■□□□□ 0.9
Dhx40Q6PE54 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Dhx40Q6PE54 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Dhx40Q6PE54 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dhx40Q6PE54 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Dhx40Q6PE54 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Dhx40Q6PE54 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dhx40Q6PE54 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Dhx40Q6PE54 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dhx40Q6PE54 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Dhx40Q6PE54 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dhx40Q6PE54 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Dhx40Q6PE54 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Dhx40Q6PE54 Fst-202ENSMUST00000223640 2612 ntBASIC20.64■□□□□ 0.9
Dhx40Q6PE54 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.64■□□□□ 0.89
Dhx40Q6PE54 Smad6-203ENSMUST00000179458 273 ntBASIC20.64■□□□□ 0.89
Dhx40Q6PE54 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dhx40Q6PE54 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dhx40Q6PE54 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Dhx40Q6PE54 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Dhx40Q6PE54 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Dhx40Q6PE54 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.63■□□□□ 0.89
Dhx40Q6PE54 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dhx40Q6PE54 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.63■□□□□ 0.89
Dhx40Q6PE54 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dhx40Q6PE54 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Dhx40Q6PE54 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.63■□□□□ 0.89
Dhx40Q6PE54 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Dhx40Q6PE54 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dhx40Q6PE54 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Dhx40Q6PE54 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Dhx40Q6PE54 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Dhx40Q6PE54 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dhx40Q6PE54 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Dhx40Q6PE54 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms