Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm4Q6IRU2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm4Q6IRU2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm4Q6IRU2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.77■□□□□ 0.92
Tpm4Q6IRU2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm4Q6IRU2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tpm4Q6IRU2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tpm4Q6IRU2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tpm4Q6IRU2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm4Q6IRU2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm4Q6IRU2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm4Q6IRU2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm4Q6IRU2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.76■□□□□ 0.91
Tpm4Q6IRU2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm4Q6IRU2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm4Q6IRU2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.76■□□□□ 0.91
Tpm4Q6IRU2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm4Q6IRU2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm4Q6IRU2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm4Q6IRU2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tpm4Q6IRU2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tpm4Q6IRU2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Gm11421-201ENSMUST00000122124 294 ntBASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tpm4Q6IRU2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm4Q6IRU2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm4Q6IRU2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm4Q6IRU2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm4Q6IRU2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm4Q6IRU2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tpm4Q6IRU2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm4Q6IRU2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.72■□□□□ 0.91
Tpm4Q6IRU2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.72■□□□□ 0.91
Tpm4Q6IRU2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm4Q6IRU2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Gm12251-201ENSMUST00000117893 792 ntBASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm4Q6IRU2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms