Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col11a2Q64739 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col11a2Q64739 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col11a2Q64739 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col11a2Q64739 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Col11a2Q64739 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.86■■□□□ 1.25
Col11a2Q64739 Gm6345-202ENSMUST00000180900 204 ntBASIC22.86■■□□□ 1.25
Col11a2Q64739 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col11a2Q64739 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC22.86■■□□□ 1.25
Col11a2Q64739 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col11a2Q64739 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Col11a2Q64739 AC124581.1-201ENSMUST00000225416 1399 ntBASIC22.86■■□□□ 1.25
Col11a2Q64739 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col11a2Q64739 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Col11a2Q64739 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col11a2Q64739 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC22.85■■□□□ 1.25
Col11a2Q64739 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col11a2Q64739 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col11a2Q64739 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col11a2Q64739 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Col11a2Q64739 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col11a2Q64739 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col11a2Q64739 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col11a2Q64739 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC22.84■■□□□ 1.25
Col11a2Q64739 Gm33142-201ENSMUST00000193913 867 ntBASIC22.84■■□□□ 1.25
Col11a2Q64739 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col11a2Q64739 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col11a2Q64739 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col11a2Q64739 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Col11a2Q64739 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Col11a2Q64739 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Col11a2Q64739 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col11a2Q64739 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC22.83■■□□□ 1.25
Col11a2Q64739 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col11a2Q64739 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col11a2Q64739 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col11a2Q64739 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col11a2Q64739 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col11a2Q64739 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.82■■□□□ 1.24
Col11a2Q64739 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col11a2Q64739 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col11a2Q64739 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.82■■□□□ 1.24
Col11a2Q64739 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col11a2Q64739 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Col11a2Q64739 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col11a2Q64739 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Col11a2Q64739 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col11a2Q64739 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Col11a2Q64739 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col11a2Q64739 Gm10013-201ENSMUST00000106074 672 ntBASIC22.81■■□□□ 1.24
Col11a2Q64739 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Col11a2Q64739 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
Col11a2Q64739 Gm18959-201ENSMUST00000208954 655 ntBASIC22.81■■□□□ 1.24
Col11a2Q64739 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col11a2Q64739 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col11a2Q64739 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Col11a2Q64739 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col11a2Q64739 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col11a2Q64739 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col11a2Q64739 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Col11a2Q64739 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col11a2Q64739 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col11a2Q64739 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Col11a2Q64739 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Col11a2Q64739 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.79■■□□□ 1.24
Col11a2Q64739 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
Col11a2Q64739 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Col11a2Q64739 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC22.79■■□□□ 1.24
Col11a2Q64739 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col11a2Q64739 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col11a2Q64739 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col11a2Q64739 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
Col11a2Q64739 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col11a2Q64739 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col11a2Q64739 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
Col11a2Q64739 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col11a2Q64739 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col11a2Q64739 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col11a2Q64739 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col11a2Q64739 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Col11a2Q64739 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Col11a2Q64739 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.78■■□□□ 1.24
Col11a2Q64739 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col11a2Q64739 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col11a2Q64739 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col11a2Q64739 AC159205.6-201ENSMUST00000224935 887 ntBASIC22.78■■□□□ 1.24
Col11a2Q64739 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col11a2Q64739 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col11a2Q64739 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col11a2Q64739 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col11a2Q64739 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
Col11a2Q64739 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col11a2Q64739 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col11a2Q64739 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
Col11a2Q64739 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.23
Col11a2Q64739 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC22.77■■□□□ 1.23
Col11a2Q64739 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC22.77■■□□□ 1.23
Col11a2Q64739 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.23
Col11a2Q64739 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col11a2Q64739 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms