Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.15■□□□□ 0.66
Six1Q62231 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six1Q62231 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.15■□□□□ 0.66
Six1Q62231 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Six1Q62231 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six1Q62231 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Six1Q62231 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Six1Q62231 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six1Q62231 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six1Q62231 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six1Q62231 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six1Q62231 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six1Q62231 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.14■□□□□ 0.65
Six1Q62231 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six1Q62231 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six1Q62231 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six1Q62231 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six1Q62231 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six1Q62231 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.14■□□□□ 0.65
Six1Q62231 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six1Q62231 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.14■□□□□ 0.65
Six1Q62231 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Six1Q62231 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.13■□□□□ 0.65
Six1Q62231 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six1Q62231 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six1Q62231 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six1Q62231 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six1Q62231 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Six1Q62231 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.13■□□□□ 0.65
Six1Q62231 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.13■□□□□ 0.65
Six1Q62231 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Six1Q62231 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Six1Q62231 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six1Q62231 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Six1Q62231 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six1Q62231 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six1Q62231 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six1Q62231 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Six1Q62231 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Six1Q62231 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six1Q62231 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six1Q62231 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six1Q62231 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.12■□□□□ 0.65
Six1Q62231 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six1Q62231 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Six1Q62231 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six1Q62231 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.12■□□□□ 0.65
Six1Q62231 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.12■□□□□ 0.65
Six1Q62231 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.12■□□□□ 0.65
Six1Q62231 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six1Q62231 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Six1Q62231 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.12■□□□□ 0.65
Six1Q62231 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six1Q62231 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Six1Q62231 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Six1Q62231 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Six1Q62231 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six1Q62231 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Six1Q62231 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six1Q62231 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Six1Q62231 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six1Q62231 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six1Q62231 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Six1Q62231 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Six1Q62231 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.11■□□□□ 0.65
Six1Q62231 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Six1Q62231 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Six1Q62231 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six1Q62231 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Six1Q62231 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six1Q62231 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six1Q62231 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six1Q62231 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Six1Q62231 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six1Q62231 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Six1Q62231 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Six1Q62231 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Six1Q62231 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six1Q62231 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six1Q62231 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six1Q62231 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six1Q62231 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Six1Q62231 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Six1Q62231 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six1Q62231 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.09■□□□□ 0.65
Six1Q62231 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Six1Q62231 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Six1Q62231 Fst-202ENSMUST00000223640 2612 ntBASIC19.09■□□□□ 0.65
Six1Q62231 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six1Q62231 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six1Q62231 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.09■□□□□ 0.65
Six1Q62231 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six1Q62231 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.08■□□□□ 0.65
Six1Q62231 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Six1Q62231 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six1Q62231 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Six1Q62231 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six1Q62231 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Six1Q62231 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Six1Q62231 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms