Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Ift88Q61371 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ift88Q61371 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ift88Q61371 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Ift88Q61371 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.58■□□□□ 0.89
Ift88Q61371 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Ift88Q61371 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ift88Q61371 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Ift88Q61371 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ift88Q61371 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ift88Q61371 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ift88Q61371 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ift88Q61371 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ift88Q61371 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ift88Q61371 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.57■□□□□ 0.88
Ift88Q61371 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ift88Q61371 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ift88Q61371 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ift88Q61371 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ift88Q61371 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ift88Q61371 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.57■□□□□ 0.88
Ift88Q61371 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ift88Q61371 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ift88Q61371 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ift88Q61371 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.56■□□□□ 0.88
Ift88Q61371 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ift88Q61371 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ift88Q61371 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.56■□□□□ 0.88
Ift88Q61371 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ift88Q61371 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ift88Q61371 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ift88Q61371 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ift88Q61371 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ift88Q61371 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
Ift88Q61371 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ift88Q61371 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ift88Q61371 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ift88Q61371 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ift88Q61371 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ift88Q61371 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ift88Q61371 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ift88Q61371 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.55■□□□□ 0.88
Ift88Q61371 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ift88Q61371 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.55■□□□□ 0.88
Ift88Q61371 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ift88Q61371 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ift88Q61371 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Ift88Q61371 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ift88Q61371 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.54■□□□□ 0.88
Ift88Q61371 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ift88Q61371 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ift88Q61371 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ift88Q61371 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ift88Q61371 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ift88Q61371 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ift88Q61371 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ift88Q61371 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ift88Q61371 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.53■□□□□ 0.88
Ift88Q61371 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ift88Q61371 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.53■□□□□ 0.88
Ift88Q61371 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.53■□□□□ 0.88
Ift88Q61371 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ift88Q61371 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ift88Q61371 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.53■□□□□ 0.88
Ift88Q61371 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ift88Q61371 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ift88Q61371 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Ift88Q61371 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ift88Q61371 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ift88Q61371 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.53■□□□□ 0.88
Ift88Q61371 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.53■□□□□ 0.88
Ift88Q61371 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ift88Q61371 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ift88Q61371 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ift88Q61371 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Ift88Q61371 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ift88Q61371 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ift88Q61371 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ift88Q61371 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ift88Q61371 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ift88Q61371 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ift88Q61371 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ift88Q61371 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.51■□□□□ 0.87
Ift88Q61371 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ift88Q61371 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ift88Q61371 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms