Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col12a1Q60847 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.6■□□□□ 0.57
Col12a1Q60847 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col12a1Q60847 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col12a1Q60847 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.6■□□□□ 0.57
Col12a1Q60847 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col12a1Q60847 Gm28033-201ENSMUST00000184224 96 ntBASIC18.6■□□□□ 0.57
Col12a1Q60847 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col12a1Q60847 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.6■□□□□ 0.57
Col12a1Q60847 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col12a1Q60847 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col12a1Q60847 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.6■□□□□ 0.57
Col12a1Q60847 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col12a1Q60847 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.59■□□□□ 0.57
Col12a1Q60847 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col12a1Q60847 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col12a1Q60847 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col12a1Q60847 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col12a1Q60847 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
Col12a1Q60847 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col12a1Q60847 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.59■□□□□ 0.57
Col12a1Q60847 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.59■□□□□ 0.57
Col12a1Q60847 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col12a1Q60847 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col12a1Q60847 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col12a1Q60847 Gm11927-201ENSMUST00000118472 759 ntBASIC18.58■□□□□ 0.57
Col12a1Q60847 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.58■□□□□ 0.57
Col12a1Q60847 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col12a1Q60847 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Col12a1Q60847 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Col12a1Q60847 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Col12a1Q60847 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col12a1Q60847 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col12a1Q60847 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Col12a1Q60847 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col12a1Q60847 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col12a1Q60847 Gm43183-201ENSMUST00000200632 547 ntBASIC18.58■□□□□ 0.56
Col12a1Q60847 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col12a1Q60847 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col12a1Q60847 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Col12a1Q60847 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col12a1Q60847 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Col12a1Q60847 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.57■□□□□ 0.56
Col12a1Q60847 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col12a1Q60847 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col12a1Q60847 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col12a1Q60847 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col12a1Q60847 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.56■□□□□ 0.56
Col12a1Q60847 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col12a1Q60847 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col12a1Q60847 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col12a1Q60847 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.56■□□□□ 0.56
Col12a1Q60847 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.55■□□□□ 0.56
Col12a1Q60847 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col12a1Q60847 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col12a1Q60847 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col12a1Q60847 Gm18025-201ENSMUST00000221733 862 ntBASIC18.55■□□□□ 0.56
Col12a1Q60847 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.55■□□□□ 0.56
Col12a1Q60847 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Col12a1Q60847 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col12a1Q60847 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.55■□□□□ 0.56
Col12a1Q60847 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col12a1Q60847 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.54■□□□□ 0.56
Col12a1Q60847 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col12a1Q60847 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Col12a1Q60847 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Col12a1Q60847 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.54■□□□□ 0.56
Col12a1Q60847 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Col12a1Q60847 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col12a1Q60847 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Col12a1Q60847 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.54■□□□□ 0.56
Col12a1Q60847 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col12a1Q60847 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col12a1Q60847 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Col12a1Q60847 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col12a1Q60847 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.53■□□□□ 0.56
Col12a1Q60847 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.53■□□□□ 0.56
Col12a1Q60847 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col12a1Q60847 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col12a1Q60847 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col12a1Q60847 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col12a1Q60847 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col12a1Q60847 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.52■□□□□ 0.56
Col12a1Q60847 Gm17661-201ENSMUST00000170317 270 ntBASIC18.52■□□□□ 0.56
Col12a1Q60847 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col12a1Q60847 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col12a1Q60847 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col12a1Q60847 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col12a1Q60847 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Col12a1Q60847 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col12a1Q60847 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col12a1Q60847 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col12a1Q60847 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.52■□□□□ 0.55
Col12a1Q60847 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col12a1Q60847 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.55
Col12a1Q60847 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col12a1Q60847 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col12a1Q60847 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col12a1Q60847 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col12a1Q60847 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms