Protein–RNA interactions for Protein: Q60764

Mkrn3, Probable E3 ubiquitin-protein ligase makorin-3, mousemouse

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mkrn3Q60764 Mir5133-201ENSMUST00000174955 77 ntBASIC20.73■□□□□ 0.91
Mkrn3Q60764 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mkrn3Q60764 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.73■□□□□ 0.91
Mkrn3Q60764 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mkrn3Q60764 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.73■□□□□ 0.91
Mkrn3Q60764 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mkrn3Q60764 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Mkrn3Q60764 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mkrn3Q60764 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
Mkrn3Q60764 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mkrn3Q60764 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mkrn3Q60764 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mkrn3Q60764 Gm13148-201ENSMUST00000118892 745 ntBASIC20.72■□□□□ 0.91
Mkrn3Q60764 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.72■□□□□ 0.91
Mkrn3Q60764 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mkrn3Q60764 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mkrn3Q60764 Gm6365-201ENSMUST00000054711 744 ntBASIC20.72■□□□□ 0.91
Mkrn3Q60764 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mkrn3Q60764 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mkrn3Q60764 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mkrn3Q60764 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.72■□□□□ 0.91
Mkrn3Q60764 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mkrn3Q60764 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mkrn3Q60764 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Mkrn3Q60764 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mkrn3Q60764 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mkrn3Q60764 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mkrn3Q60764 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mkrn3Q60764 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mkrn3Q60764 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.71■□□□□ 0.91
Mkrn3Q60764 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mkrn3Q60764 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mkrn3Q60764 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.71■□□□□ 0.91
Mkrn3Q60764 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mkrn3Q60764 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mkrn3Q60764 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Mkrn3Q60764 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Mkrn3Q60764 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
Mkrn3Q60764 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Mkrn3Q60764 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Mkrn3Q60764 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.7■□□□□ 0.9
Mkrn3Q60764 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mkrn3Q60764 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mkrn3Q60764 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.7■□□□□ 0.9
Mkrn3Q60764 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mkrn3Q60764 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Mkrn3Q60764 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mkrn3Q60764 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mkrn3Q60764 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mkrn3Q60764 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mkrn3Q60764 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mkrn3Q60764 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mkrn3Q60764 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mkrn3Q60764 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Mkrn3Q60764 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.69■□□□□ 0.9
Mkrn3Q60764 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mkrn3Q60764 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Mkrn3Q60764 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Mkrn3Q60764 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mkrn3Q60764 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mkrn3Q60764 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Mkrn3Q60764 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mkrn3Q60764 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mkrn3Q60764 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mkrn3Q60764 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mkrn3Q60764 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mkrn3Q60764 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mkrn3Q60764 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mkrn3Q60764 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Mkrn3Q60764 Gm7290-201ENSMUST00000104990 617 ntBASIC20.68■□□□□ 0.9
Mkrn3Q60764 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.68■□□□□ 0.9
Mkrn3Q60764 Gm12918-201ENSMUST00000120234 636 ntBASIC20.68■□□□□ 0.9
Mkrn3Q60764 Gm15710-201ENSMUST00000121821 636 ntBASIC20.68■□□□□ 0.9
Mkrn3Q60764 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.68■□□□□ 0.9
Mkrn3Q60764 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.68■□□□□ 0.9
Mkrn3Q60764 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.68■□□□□ 0.9
Mkrn3Q60764 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.68■□□□□ 0.9
Mkrn3Q60764 Gm5075-201ENSMUST00000196916 622 ntBASIC20.68■□□□□ 0.9
Mkrn3Q60764 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.68■□□□□ 0.9
Mkrn3Q60764 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.68■□□□□ 0.9
Mkrn3Q60764 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.68■□□□□ 0.9
Mkrn3Q60764 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mkrn3Q60764 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Mkrn3Q60764 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mkrn3Q60764 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mkrn3Q60764 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mkrn3Q60764 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mkrn3Q60764 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mkrn3Q60764 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Mkrn3Q60764 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mkrn3Q60764 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mkrn3Q60764 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mkrn3Q60764 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mkrn3Q60764 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mkrn3Q60764 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.67■□□□□ 0.9
Mkrn3Q60764 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mkrn3Q60764 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.67■□□□□ 0.9
Mkrn3Q60764 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mkrn3Q60764 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mkrn3Q60764 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms