Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf43Q5NCP0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Gm37055-201ENSMUST00000191866 133 ntBASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Rnf43Q5NCP0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Gm15565-201ENSMUST00000118890 427 ntBASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rnf43Q5NCP0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf43Q5NCP0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf43Q5NCP0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf43Q5NCP0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.91■□□□□ 0.62
Rnf43Q5NCP0 Gm11643-201ENSMUST00000119578 864 ntBASIC18.91■□□□□ 0.62
Rnf43Q5NCP0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf43Q5NCP0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rnf43Q5NCP0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf43Q5NCP0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rnf43Q5NCP0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rnf43Q5NCP0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Rnf43Q5NCP0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Rnf43Q5NCP0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.89■□□□□ 0.61
Rnf43Q5NCP0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf43Q5NCP0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.89■□□□□ 0.61
Rnf43Q5NCP0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf43Q5NCP0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rnf43Q5NCP0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.89■□□□□ 0.61
Rnf43Q5NCP0 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.89■□□□□ 0.61
Rnf43Q5NCP0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf43Q5NCP0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf43Q5NCP0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Rnf43Q5NCP0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rnf43Q5NCP0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms