Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn2bQ56A07 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn2bQ56A07 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn2bQ56A07 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn2bQ56A07 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Scn2bQ56A07 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn2bQ56A07 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn2bQ56A07 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn2bQ56A07 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn2bQ56A07 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn2bQ56A07 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn2bQ56A07 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn2bQ56A07 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn2bQ56A07 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn2bQ56A07 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Scn2bQ56A07 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn2bQ56A07 Gm7860-201ENSMUST00000121190 879 ntBASIC18.39■□□□□ 0.53
Scn2bQ56A07 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn2bQ56A07 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.39■□□□□ 0.53
Scn2bQ56A07 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn2bQ56A07 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn2bQ56A07 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn2bQ56A07 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn2bQ56A07 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Scn2bQ56A07 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.38■□□□□ 0.53
Scn2bQ56A07 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn2bQ56A07 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.37■□□□□ 0.53
Scn2bQ56A07 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn2bQ56A07 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.36■□□□□ 0.53
Scn2bQ56A07 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Scn2bQ56A07 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn2bQ56A07 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn2bQ56A07 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn2bQ56A07 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn2bQ56A07 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn2bQ56A07 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn2bQ56A07 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn2bQ56A07 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Scn2bQ56A07 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Scn2bQ56A07 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn2bQ56A07 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn2bQ56A07 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn2bQ56A07 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn2bQ56A07 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms