Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Srrm1Q52KI8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Srrm1Q52KI8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.9■□□□□ 0.94
Srrm1Q52KI8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Srrm1Q52KI8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Srrm1Q52KI8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Srrm1Q52KI8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
Srrm1Q52KI8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Srrm1Q52KI8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Srrm1Q52KI8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Srrm1Q52KI8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Srrm1Q52KI8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Srrm1Q52KI8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Srrm1Q52KI8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Srrm1Q52KI8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srrm1Q52KI8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srrm1Q52KI8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Srrm1Q52KI8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srrm1Q52KI8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.88■□□□□ 0.93
Srrm1Q52KI8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.88■□□□□ 0.93
Srrm1Q52KI8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.88■□□□□ 0.93
Srrm1Q52KI8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Srrm1Q52KI8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srrm1Q52KI8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Notumos-201ENSMUST00000151998 2659 ntBASIC20.87■□□□□ 0.93
Srrm1Q52KI8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srrm1Q52KI8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Srrm1Q52KI8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srrm1Q52KI8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srrm1Q52KI8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srrm1Q52KI8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srrm1Q52KI8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.86■□□□□ 0.93
Srrm1Q52KI8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srrm1Q52KI8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srrm1Q52KI8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.86■□□□□ 0.93
Srrm1Q52KI8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Srrm1Q52KI8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srrm1Q52KI8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srrm1Q52KI8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Srrm1Q52KI8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srrm1Q52KI8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srrm1Q52KI8 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.84■□□□□ 0.93
Srrm1Q52KI8 Gm21362-201ENSMUST00000194272 928 ntBASIC20.84■□□□□ 0.93
Srrm1Q52KI8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srrm1Q52KI8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srrm1Q52KI8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Srrm1Q52KI8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srrm1Q52KI8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srrm1Q52KI8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Srrm1Q52KI8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Srrm1Q52KI8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Srrm1Q52KI8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Srrm1Q52KI8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Srrm1Q52KI8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Srrm1Q52KI8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Srrm1Q52KI8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Srrm1Q52KI8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Srrm1Q52KI8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Srrm1Q52KI8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Srrm1Q52KI8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Srrm1Q52KI8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Srrm1Q52KI8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Srrm1Q52KI8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.82■□□□□ 0.92
Srrm1Q52KI8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Srrm1Q52KI8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.82■□□□□ 0.92
Srrm1Q52KI8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Srrm1Q52KI8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Srrm1Q52KI8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Srrm1Q52KI8 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.82■□□□□ 0.92
Srrm1Q52KI8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Srrm1Q52KI8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms