Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Gm22697-201ENSMUST00000175194 63 ntBASIC32.91■■■□□ 2.86
Pds5bQ4VA53 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Pds5bQ4VA53 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC32.9■■■□□ 2.86
Pds5bQ4VA53 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
Pds5bQ4VA53 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC32.9■■■□□ 2.86
Pds5bQ4VA53 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Pds5bQ4VA53 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Pds5bQ4VA53 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Pds5bQ4VA53 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Pds5bQ4VA53 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Pds5bQ4VA53 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC32.89■■■□□ 2.86
Pds5bQ4VA53 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Pds5bQ4VA53 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC32.89■■■□□ 2.86
Pds5bQ4VA53 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
Pds5bQ4VA53 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC32.88■■■□□ 2.85
Pds5bQ4VA53 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
Pds5bQ4VA53 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC32.87■■■□□ 2.85
Pds5bQ4VA53 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
Pds5bQ4VA53 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Pds5bQ4VA53 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Pds5bQ4VA53 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
Pds5bQ4VA53 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
Pds5bQ4VA53 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Pds5bQ4VA53 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Pds5bQ4VA53 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Pds5bQ4VA53 Gm17641-201ENSMUST00000166328 2350 ntBASIC32.86■■■□□ 2.85
Pds5bQ4VA53 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC32.86■■■□□ 2.85
Pds5bQ4VA53 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC32.86■■■□□ 2.85
Pds5bQ4VA53 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC32.85■■■□□ 2.85
Pds5bQ4VA53 Gm43353-201ENSMUST00000199224 1295 ntBASIC32.85■■■□□ 2.85
Pds5bQ4VA53 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC32.85■■■□□ 2.85
Pds5bQ4VA53 Gm20100-201ENSMUST00000209418 2272 ntBASIC32.85■■■□□ 2.85
Pds5bQ4VA53 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
Pds5bQ4VA53 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Pds5bQ4VA53 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC32.85■■■□□ 2.85
Pds5bQ4VA53 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
Pds5bQ4VA53 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Pds5bQ4VA53 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Pds5bQ4VA53 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC32.85■■■□□ 2.85
Pds5bQ4VA53 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Pds5bQ4VA53 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Pds5bQ4VA53 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC32.85■■■□□ 2.85
Pds5bQ4VA53 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC32.85■■■□□ 2.85
Pds5bQ4VA53 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC32.84■■■□□ 2.85
Pds5bQ4VA53 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Pds5bQ4VA53 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Pds5bQ4VA53 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Pds5bQ4VA53 Gm2274-201ENSMUST00000184539 609 ntBASIC32.83■■■□□ 2.85
Pds5bQ4VA53 Gm27704-201ENSMUST00000185094 107 ntBASIC32.83■■■□□ 2.85
Pds5bQ4VA53 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Pds5bQ4VA53 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Pds5bQ4VA53 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
Pds5bQ4VA53 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Pds5bQ4VA53 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
Pds5bQ4VA53 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC32.82■■■□□ 2.84
Pds5bQ4VA53 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC32.81■■■□□ 2.84
Pds5bQ4VA53 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
Pds5bQ4VA53 Gm17807-201ENSMUST00000186869 298 ntBASIC32.81■■■□□ 2.84
Pds5bQ4VA53 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC32.81■■■□□ 2.84
Pds5bQ4VA53 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Pds5bQ4VA53 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Pds5bQ4VA53 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Pds5bQ4VA53 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Pds5bQ4VA53 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Pds5bQ4VA53 Gm18669-201ENSMUST00000216049 778 ntBASIC32.8■■■□□ 2.84
Pds5bQ4VA53 Gm8309-201ENSMUST00000206627 1448 ntBASIC32.8■■■□□ 2.84
Pds5bQ4VA53 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC32.8■■■□□ 2.84
Pds5bQ4VA53 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Pds5bQ4VA53 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
Pds5bQ4VA53 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Pds5bQ4VA53 Gm8258-201ENSMUST00000055593 1449 ntBASIC32.79■■■□□ 2.84
Pds5bQ4VA53 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC32.79■■■□□ 2.84
Pds5bQ4VA53 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC32.79■■■□□ 2.84
Pds5bQ4VA53 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Pds5bQ4VA53 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC32.78■■■□□ 2.84
Pds5bQ4VA53 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
Pds5bQ4VA53 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Pds5bQ4VA53 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC32.78■■■□□ 2.84
Pds5bQ4VA53 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC32.78■■■□□ 2.84
Pds5bQ4VA53 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Pds5bQ4VA53 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Pds5bQ4VA53 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Pds5bQ4VA53 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
Pds5bQ4VA53 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Pds5bQ4VA53 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
Pds5bQ4VA53 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC32.77■■■□□ 2.84
Pds5bQ4VA53 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC32.77■■■□□ 2.84
Pds5bQ4VA53 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Pds5bQ4VA53 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Pds5bQ4VA53 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC32.77■■■□□ 2.84
Pds5bQ4VA53 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC32.77■■■□□ 2.84
Pds5bQ4VA53 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Pds5bQ4VA53 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC32.77■■■□□ 2.84
Pds5bQ4VA53 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Pds5bQ4VA53 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
Pds5bQ4VA53 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
Pds5bQ4VA53 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC32.77■■■□□ 2.84
Pds5bQ4VA53 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC32.77■■■□□ 2.84
Pds5bQ4VA53 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
Pds5bQ4VA53 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC32.76■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms