Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx49Q4FZF3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx49Q4FZF3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx49Q4FZF3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx49Q4FZF3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
Ddx49Q4FZF3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx49Q4FZF3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx49Q4FZF3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.64■■□□□ 1.05
Ddx49Q4FZF3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Ddx49Q4FZF3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.64■■□□□ 1.05
Ddx49Q4FZF3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx49Q4FZF3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ddx49Q4FZF3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx49Q4FZF3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.62■■□□□ 1.05
Ddx49Q4FZF3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx49Q4FZF3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx49Q4FZF3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ddx49Q4FZF3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx49Q4FZF3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.62■■□□□ 1.05
Ddx49Q4FZF3 Mir5122-201ENSMUST00000175004 89 ntBASIC21.62■■□□□ 1.05
Ddx49Q4FZF3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx49Q4FZF3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx49Q4FZF3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ddx49Q4FZF3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx49Q4FZF3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx49Q4FZF3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.61■■□□□ 1.05
Ddx49Q4FZF3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx49Q4FZF3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx49Q4FZF3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx49Q4FZF3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx49Q4FZF3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx49Q4FZF3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx49Q4FZF3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx49Q4FZF3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx49Q4FZF3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx49Q4FZF3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ddx49Q4FZF3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.61■■□□□ 1.05
Ddx49Q4FZF3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx49Q4FZF3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx49Q4FZF3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.6■■□□□ 1.05
Ddx49Q4FZF3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx49Q4FZF3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx49Q4FZF3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.6■■□□□ 1.05
Ddx49Q4FZF3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx49Q4FZF3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx49Q4FZF3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx49Q4FZF3 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.59■■□□□ 1.05
Ddx49Q4FZF3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx49Q4FZF3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ddx49Q4FZF3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx49Q4FZF3 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.59■■□□□ 1.05
Ddx49Q4FZF3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx49Q4FZF3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx49Q4FZF3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx49Q4FZF3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
Ddx49Q4FZF3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx49Q4FZF3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx49Q4FZF3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ddx49Q4FZF3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx49Q4FZF3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx49Q4FZF3 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.58■■□□□ 1.05
Ddx49Q4FZF3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Ddx49Q4FZF3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx49Q4FZF3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Ddx49Q4FZF3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx49Q4FZF3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.58■■□□□ 1.04
Ddx49Q4FZF3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx49Q4FZF3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx49Q4FZF3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.57■■□□□ 1.04
Ddx49Q4FZF3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.57■■□□□ 1.04
Ddx49Q4FZF3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.57■■□□□ 1.04
Ddx49Q4FZF3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx49Q4FZF3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx49Q4FZF3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx49Q4FZF3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ddx49Q4FZF3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx49Q4FZF3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx49Q4FZF3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx49Q4FZF3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx49Q4FZF3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx49Q4FZF3 Gm10231-201ENSMUST00000181584 441 ntBASIC21.56■■□□□ 1.04
Ddx49Q4FZF3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx49Q4FZF3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.56■■□□□ 1.04
Ddx49Q4FZF3 Gm43799-201ENSMUST00000201845 579 ntBASIC21.56■■□□□ 1.04
Ddx49Q4FZF3 Gm10175-202ENSMUST00000208752 441 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms