Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf38aQ4FK66 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf38aQ4FK66 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf38aQ4FK66 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf38aQ4FK66 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf38aQ4FK66 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf38aQ4FK66 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Prpf38aQ4FK66 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf38aQ4FK66 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf38aQ4FK66 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf38aQ4FK66 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf38aQ4FK66 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Prpf38aQ4FK66 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.73■■□□□ 1.07
Prpf38aQ4FK66 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.73■■□□□ 1.07
Prpf38aQ4FK66 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf38aQ4FK66 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Prpf38aQ4FK66 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.73■■□□□ 1.07
Prpf38aQ4FK66 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.73■■□□□ 1.07
Prpf38aQ4FK66 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf38aQ4FK66 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf38aQ4FK66 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Prpf38aQ4FK66 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf38aQ4FK66 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.72■■□□□ 1.07
Prpf38aQ4FK66 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Prpf38aQ4FK66 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf38aQ4FK66 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.72■■□□□ 1.07
Prpf38aQ4FK66 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Prpf38aQ4FK66 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf38aQ4FK66 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf38aQ4FK66 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf38aQ4FK66 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Prpf38aQ4FK66 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38aQ4FK66 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38aQ4FK66 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38aQ4FK66 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.71■■□□□ 1.07
Prpf38aQ4FK66 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.71■■□□□ 1.07
Prpf38aQ4FK66 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Prpf38aQ4FK66 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38aQ4FK66 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38aQ4FK66 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38aQ4FK66 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38aQ4FK66 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Prpf38aQ4FK66 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Prpf38aQ4FK66 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Prpf38aQ4FK66 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf38aQ4FK66 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf38aQ4FK66 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf38aQ4FK66 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Prpf38aQ4FK66 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf38aQ4FK66 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf38aQ4FK66 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Prpf38aQ4FK66 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Prpf38aQ4FK66 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Gm11249-201ENSMUST00000117071 859 ntBASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Gm5643-201ENSMUST00000117081 966 ntBASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Prpf38aQ4FK66 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms