Protein–RNA interactions for Protein: Q3V3E1

Ubash3a, Ubiquitin-associated and SH3 domain-containing protein A, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubash3aQ3V3E1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ubash3aQ3V3E1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.39■■□□□ 1.01
Ubash3aQ3V3E1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubash3aQ3V3E1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubash3aQ3V3E1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubash3aQ3V3E1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubash3aQ3V3E1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.39■■□□□ 1.01
Ubash3aQ3V3E1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubash3aQ3V3E1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ubash3aQ3V3E1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubash3aQ3V3E1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubash3aQ3V3E1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubash3aQ3V3E1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubash3aQ3V3E1 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.37■■□□□ 1.01
Ubash3aQ3V3E1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubash3aQ3V3E1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ubash3aQ3V3E1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubash3aQ3V3E1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ubash3aQ3V3E1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ubash3aQ3V3E1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubash3aQ3V3E1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ubash3aQ3V3E1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.37■■□□□ 1.01
Ubash3aQ3V3E1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubash3aQ3V3E1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubash3aQ3V3E1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubash3aQ3V3E1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ubash3aQ3V3E1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ubash3aQ3V3E1 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.36■■□□□ 1.01
Ubash3aQ3V3E1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.36■■□□□ 1.01
Ubash3aQ3V3E1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ubash3aQ3V3E1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ubash3aQ3V3E1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ubash3aQ3V3E1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ubash3aQ3V3E1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ubash3aQ3V3E1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ubash3aQ3V3E1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubash3aQ3V3E1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubash3aQ3V3E1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubash3aQ3V3E1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubash3aQ3V3E1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ubash3aQ3V3E1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.35■■□□□ 1.01
Ubash3aQ3V3E1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubash3aQ3V3E1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubash3aQ3V3E1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ubash3aQ3V3E1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubash3aQ3V3E1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubash3aQ3V3E1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubash3aQ3V3E1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubash3aQ3V3E1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubash3aQ3V3E1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Ubash3aQ3V3E1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubash3aQ3V3E1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ubash3aQ3V3E1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ubash3aQ3V3E1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Ubash3aQ3V3E1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Ubash3aQ3V3E1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ubash3aQ3V3E1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ubash3aQ3V3E1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ubash3aQ3V3E1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ubash3aQ3V3E1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ubash3aQ3V3E1 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.32■■□□□ 1
Ubash3aQ3V3E1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.32■■□□□ 1
Ubash3aQ3V3E1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.32■■□□□ 1
Ubash3aQ3V3E1 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.32■■□□□ 1
Ubash3aQ3V3E1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.32■■□□□ 1
Ubash3aQ3V3E1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ubash3aQ3V3E1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ubash3aQ3V3E1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ubash3aQ3V3E1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.31■■□□□ 1
Ubash3aQ3V3E1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms