Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rnf223Q3UV31 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf223Q3UV31 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Rnf223Q3UV31 Notumos-201ENSMUST00000151998 2659 ntBASIC18.09■□□□□ 0.49
Rnf223Q3UV31 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf223Q3UV31 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf223Q3UV31 Gm12896-201ENSMUST00000118430 226 ntBASIC18.09■□□□□ 0.49
Rnf223Q3UV31 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rnf223Q3UV31 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rnf223Q3UV31 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf223Q3UV31 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf223Q3UV31 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf223Q3UV31 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Rnf223Q3UV31 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf223Q3UV31 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf223Q3UV31 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rnf223Q3UV31 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf223Q3UV31 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Rnf223Q3UV31 Gm44549-201ENSMUST00000208351 577 ntBASIC18.08■□□□□ 0.48
Rnf223Q3UV31 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.08■□□□□ 0.48
Rnf223Q3UV31 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf223Q3UV31 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf223Q3UV31 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf223Q3UV31 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf223Q3UV31 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf223Q3UV31 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf223Q3UV31 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf223Q3UV31 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf223Q3UV31 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rnf223Q3UV31 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.07■□□□□ 0.48
Rnf223Q3UV31 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf223Q3UV31 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf223Q3UV31 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf223Q3UV31 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf223Q3UV31 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf223Q3UV31 Gm27275-201ENSMUST00000184318 272 ntBASIC18.07■□□□□ 0.48
Rnf223Q3UV31 Trmt13-210ENSMUST00000198454 880 ntBASIC18.07■□□□□ 0.48
Rnf223Q3UV31 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.07■□□□□ 0.48
Rnf223Q3UV31 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.07■□□□□ 0.48
Rnf223Q3UV31 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rnf223Q3UV31 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rnf223Q3UV31 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf223Q3UV31 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf223Q3UV31 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf223Q3UV31 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf223Q3UV31 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf223Q3UV31 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf223Q3UV31 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf223Q3UV31 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf223Q3UV31 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rnf223Q3UV31 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rnf223Q3UV31 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rnf223Q3UV31 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf223Q3UV31 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf223Q3UV31 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Rnf223Q3UV31 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf223Q3UV31 Gm2559-201ENSMUST00000201323 363 ntBASIC18.05■□□□□ 0.48
Rnf223Q3UV31 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf223Q3UV31 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.05■□□□□ 0.48
Rnf223Q3UV31 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rnf223Q3UV31 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rnf223Q3UV31 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf223Q3UV31 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.03■□□□□ 0.48
Rnf223Q3UV31 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf223Q3UV31 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf223Q3UV31 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf223Q3UV31 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rnf223Q3UV31 Dio3-201ENSMUST00000097228 1449 ntBASIC18.02■□□□□ 0.48
Rnf223Q3UV31 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf223Q3UV31 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms