Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp30Q3UN04 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Usp30Q3UN04 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Usp30Q3UN04 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp30Q3UN04 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Usp30Q3UN04 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp30Q3UN04 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Usp30Q3UN04 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp30Q3UN04 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp30Q3UN04 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Usp30Q3UN04 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp30Q3UN04 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.69■□□□□ 0.58
Usp30Q3UN04 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Usp30Q3UN04 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.69■□□□□ 0.58
Usp30Q3UN04 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp30Q3UN04 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp30Q3UN04 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp30Q3UN04 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Usp30Q3UN04 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp30Q3UN04 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Usp30Q3UN04 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp30Q3UN04 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.68■□□□□ 0.58
Usp30Q3UN04 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Usp30Q3UN04 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp30Q3UN04 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.68■□□□□ 0.58
Usp30Q3UN04 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp30Q3UN04 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp30Q3UN04 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp30Q3UN04 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp30Q3UN04 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Usp30Q3UN04 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.67■□□□□ 0.58
Usp30Q3UN04 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp30Q3UN04 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp30Q3UN04 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp30Q3UN04 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.67■□□□□ 0.58
Usp30Q3UN04 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.67■□□□□ 0.58
Usp30Q3UN04 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp30Q3UN04 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp30Q3UN04 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp30Q3UN04 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp30Q3UN04 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Usp30Q3UN04 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp30Q3UN04 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.66■□□□□ 0.58
Usp30Q3UN04 Gm2399-201ENSMUST00000104944 225 ntBASIC18.66■□□□□ 0.58
Usp30Q3UN04 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp30Q3UN04 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Usp30Q3UN04 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp30Q3UN04 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Usp30Q3UN04 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Usp30Q3UN04 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp30Q3UN04 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp30Q3UN04 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp30Q3UN04 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Usp30Q3UN04 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp30Q3UN04 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp30Q3UN04 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp30Q3UN04 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp30Q3UN04 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp30Q3UN04 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp30Q3UN04 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp30Q3UN04 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Usp30Q3UN04 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp30Q3UN04 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp30Q3UN04 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp30Q3UN04 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp30Q3UN04 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp30Q3UN04 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp30Q3UN04 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp30Q3UN04 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp30Q3UN04 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp30Q3UN04 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp30Q3UN04 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp30Q3UN04 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Usp30Q3UN04 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms