Protein–RNA interactions for Protein: Q3SXB8

Colec11, Collectin-11, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colec11Q3SXB8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Colec11Q3SXB8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Colec11Q3SXB8 Gm5075-201ENSMUST00000196916 622 ntBASIC18.85■□□□□ 0.61
Colec11Q3SXB8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Colec11Q3SXB8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.85■□□□□ 0.61
Colec11Q3SXB8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.85■□□□□ 0.61
Colec11Q3SXB8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Colec11Q3SXB8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Colec11Q3SXB8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Colec11Q3SXB8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Colec11Q3SXB8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Colec11Q3SXB8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Colec11Q3SXB8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Colec11Q3SXB8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Colec11Q3SXB8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Colec11Q3SXB8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.83■□□□□ 0.61
Colec11Q3SXB8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Colec11Q3SXB8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Colec11Q3SXB8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Colec11Q3SXB8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Colec11Q3SXB8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Colec11Q3SXB8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Colec11Q3SXB8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Colec11Q3SXB8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.83■□□□□ 0.6
Colec11Q3SXB8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Colec11Q3SXB8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Colec11Q3SXB8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Colec11Q3SXB8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Colec11Q3SXB8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.81■□□□□ 0.6
Colec11Q3SXB8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Colec11Q3SXB8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Colec11Q3SXB8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Colec11Q3SXB8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.81■□□□□ 0.6
Colec11Q3SXB8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Colec11Q3SXB8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Colec11Q3SXB8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Colec11Q3SXB8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Colec11Q3SXB8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Colec11Q3SXB8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Colec11Q3SXB8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Colec11Q3SXB8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Golph3-205ENSMUST00000228671 2842 ntBASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Colec11Q3SXB8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Colec11Q3SXB8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Colec11Q3SXB8 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.79■□□□□ 0.6
Colec11Q3SXB8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Colec11Q3SXB8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms