Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.82■□□□□ 0.28
Chd8Q09XV5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.81■□□□□ 0.28
Chd8Q09XV5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd8Q09XV5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd8Q09XV5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd8Q09XV5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd8Q09XV5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd8Q09XV5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd8Q09XV5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.81■□□□□ 0.28
Chd8Q09XV5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd8Q09XV5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd8Q09XV5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chd8Q09XV5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd8Q09XV5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd8Q09XV5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd8Q09XV5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd8Q09XV5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.8■□□□□ 0.28
Chd8Q09XV5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd8Q09XV5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd8Q09XV5 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.8■□□□□ 0.28
Chd8Q09XV5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd8Q09XV5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd8Q09XV5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.8■□□□□ 0.28
Chd8Q09XV5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chd8Q09XV5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.8■□□□□ 0.28
Chd8Q09XV5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chd8Q09XV5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd8Q09XV5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Chd8Q09XV5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd8Q09XV5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd8Q09XV5 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.79■□□□□ 0.28
Chd8Q09XV5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd8Q09XV5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Chd8Q09XV5 Gm27702-201ENSMUST00000184512 56 ntBASIC16.79■□□□□ 0.28
Chd8Q09XV5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.79■□□□□ 0.28
Chd8Q09XV5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd8Q09XV5 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd8Q09XV5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd8Q09XV5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Chd8Q09XV5 Gm10175-201ENSMUST00000086013 645 ntBASIC16.79■□□□□ 0.28
Chd8Q09XV5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd8Q09XV5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Chd8Q09XV5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chd8Q09XV5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.78■□□□□ 0.28
Chd8Q09XV5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd8Q09XV5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd8Q09XV5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd8Q09XV5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd8Q09XV5 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.78■□□□□ 0.28
Chd8Q09XV5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd8Q09XV5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd8Q09XV5 Gm8097-201ENSMUST00000117903 829 ntBASIC16.78■□□□□ 0.28
Chd8Q09XV5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd8Q09XV5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd8Q09XV5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd8Q09XV5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd8Q09XV5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd8Q09XV5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Chd8Q09XV5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Chd8Q09XV5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd8Q09XV5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd8Q09XV5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd8Q09XV5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Chd8Q09XV5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.77■□□□□ 0.27
Chd8Q09XV5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd8Q09XV5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chd8Q09XV5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd8Q09XV5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd8Q09XV5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Chd8Q09XV5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Chd8Q09XV5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd8Q09XV5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Chd8Q09XV5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd8Q09XV5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd8Q09XV5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.76■□□□□ 0.27
Chd8Q09XV5 Gm17808-201ENSMUST00000200859 894 ntBASIC16.76■□□□□ 0.27
Chd8Q09XV5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chd8Q09XV5 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.75■□□□□ 0.27
Chd8Q09XV5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd8Q09XV5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd8Q09XV5 Gm37292-201ENSMUST00000192062 758 ntBASIC16.75■□□□□ 0.27
Chd8Q09XV5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chd8Q09XV5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chd8Q09XV5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chd8Q09XV5 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.74■□□□□ 0.27
Chd8Q09XV5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd8Q09XV5 Mtag2-201ENSMUST00000058665 714 ntBASIC16.74■□□□□ 0.27
Chd8Q09XV5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chd8Q09XV5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.74■□□□□ 0.27
Chd8Q09XV5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms