Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Nkx3-2P97503 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.49■□□□□ 0.39
Nkx3-2P97503 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-2P97503 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nkx3-2P97503 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-2P97503 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Gm26524-201ENSMUST00000192339 390 ntBASIC17.47■□□□□ 0.39
Nkx3-2P97503 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-2P97503 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx3-2P97503 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nkx3-2P97503 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx3-2P97503 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nkx3-2P97503 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Nkx3-2P97503 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nkx3-2P97503 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx3-2P97503 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.46■□□□□ 0.39
Nkx3-2P97503 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx3-2P97503 Gm5408-201ENSMUST00000197998 747 ntBASIC17.46■□□□□ 0.39
Nkx3-2P97503 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx3-2P97503 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.46■□□□□ 0.39
Nkx3-2P97503 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx3-2P97503 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx3-2P97503 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx3-2P97503 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx3-2P97503 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.46■□□□□ 0.39
Nkx3-2P97503 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx3-2P97503 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.46■□□□□ 0.38
Nkx3-2P97503 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-2P97503 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-2P97503 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-2P97503 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-2P97503 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-2P97503 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
Nkx3-2P97503 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-2P97503 Gm20760-201ENSMUST00000179197 648 ntBASIC17.45■□□□□ 0.38
Nkx3-2P97503 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.45■□□□□ 0.38
Nkx3-2P97503 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-2P97503 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-2P97503 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nkx3-2P97503 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Nkx3-2P97503 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nkx3-2P97503 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Nkx3-2P97503 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-2P97503 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-2P97503 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.44■□□□□ 0.38
Nkx3-2P97503 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms