Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PrkdcP97313 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.91□□□□□ -0.34
PrkdcP97313 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Gm17641-201ENSMUST00000166328 2350 ntBASIC12.91□□□□□ -0.34
PrkdcP97313 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.91□□□□□ -0.34
PrkdcP97313 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.91□□□□□ -0.34
PrkdcP97313 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PrkdcP97313 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrkdcP97313 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.9□□□□□ -0.34
PrkdcP97313 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrkdcP97313 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrkdcP97313 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrkdcP97313 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrkdcP97313 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrkdcP97313 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
PrkdcP97313 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrkdcP97313 Gm7153-201ENSMUST00000117092 455 ntBASIC12.9□□□□□ -0.34
PrkdcP97313 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrkdcP97313 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrkdcP97313 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.9□□□□□ -0.34
PrkdcP97313 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
PrkdcP97313 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrkdcP97313 Gm18669-201ENSMUST00000216049 778 ntBASIC12.9□□□□□ -0.35
PrkdcP97313 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
PrkdcP97313 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PrkdcP97313 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.89□□□□□ -0.35
PrkdcP97313 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrkdcP97313 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrkdcP97313 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PrkdcP97313 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.89□□□□□ -0.35
PrkdcP97313 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrkdcP97313 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrkdcP97313 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
PrkdcP97313 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrkdcP97313 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrkdcP97313 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.89□□□□□ -0.35
PrkdcP97313 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.89□□□□□ -0.35
PrkdcP97313 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PrkdcP97313 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrkdcP97313 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC12.88□□□□□ -0.35
PrkdcP97313 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrkdcP97313 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrkdcP97313 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PrkdcP97313 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PrkdcP97313 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrkdcP97313 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.88□□□□□ -0.35
PrkdcP97313 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrkdcP97313 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrkdcP97313 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrkdcP97313 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.88□□□□□ -0.35
PrkdcP97313 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PrkdcP97313 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrkdcP97313 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrkdcP97313 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrkdcP97313 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PrkdcP97313 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
PrkdcP97313 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrkdcP97313 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrkdcP97313 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrkdcP97313 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrkdcP97313 Gm32051-202ENSMUST00000197905 2385 ntBASIC12.87□□□□□ -0.35
PrkdcP97313 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrkdcP97313 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.87□□□□□ -0.35
PrkdcP97313 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.87□□□□□ -0.35
PrkdcP97313 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrkdcP97313 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrkdcP97313 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.87□□□□□ -0.35
PrkdcP97313 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrkdcP97313 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrkdcP97313 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrkdcP97313 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
PrkdcP97313 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrkdcP97313 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkdcP97313 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkdcP97313 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.86□□□□□ -0.35
PrkdcP97313 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkdcP97313 Gm24589-201ENSMUST00000116692 94 ntBASIC12.86□□□□□ -0.35
PrkdcP97313 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkdcP97313 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrkdcP97313 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkdcP97313 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
PrkdcP97313 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrkdcP97313 Gm12382-201ENSMUST00000122005 922 ntBASIC12.86□□□□□ -0.35
PrkdcP97313 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrkdcP97313 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrkdcP97313 Gm10138-203ENSMUST00000206952 366 ntBASIC12.86□□□□□ -0.35
PrkdcP97313 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrkdcP97313 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms