Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ThraP63058 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ThraP63058 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.75■□□□□ 0.59
ThraP63058 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.75■□□□□ 0.59
ThraP63058 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.75■□□□□ 0.59
ThraP63058 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ThraP63058 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ThraP63058 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ThraP63058 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ThraP63058 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ThraP63058 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.74■□□□□ 0.59
ThraP63058 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.74■□□□□ 0.59
ThraP63058 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ThraP63058 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ThraP63058 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
ThraP63058 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.74■□□□□ 0.59
ThraP63058 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ThraP63058 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.74■□□□□ 0.59
ThraP63058 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.73■□□□□ 0.59
ThraP63058 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ThraP63058 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ThraP63058 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ThraP63058 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ThraP63058 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ThraP63058 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ThraP63058 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.73■□□□□ 0.59
ThraP63058 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.73■□□□□ 0.59
ThraP63058 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ThraP63058 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ThraP63058 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ThraP63058 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ThraP63058 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ThraP63058 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
ThraP63058 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ThraP63058 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ThraP63058 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ThraP63058 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ThraP63058 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ThraP63058 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ThraP63058 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ThraP63058 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ThraP63058 AA386476-201ENSMUST00000098781 1665 ntBASIC18.72■□□□□ 0.59
ThraP63058 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ThraP63058 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ThraP63058 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ThraP63058 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ThraP63058 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ThraP63058 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ThraP63058 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ThraP63058 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ThraP63058 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ThraP63058 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ThraP63058 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ThraP63058 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ThraP63058 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ThraP63058 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ThraP63058 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
ThraP63058 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ThraP63058 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ThraP63058 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ThraP63058 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.71■□□□□ 0.58
ThraP63058 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ThraP63058 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ThraP63058 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
ThraP63058 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.7■□□□□ 0.58
ThraP63058 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.7■□□□□ 0.58
ThraP63058 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.7■□□□□ 0.58
ThraP63058 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ThraP63058 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ThraP63058 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ThraP63058 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ThraP63058 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ThraP63058 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ThraP63058 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.7■□□□□ 0.58
ThraP63058 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ThraP63058 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ThraP63058 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ThraP63058 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ThraP63058 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ThraP63058 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ThraP63058 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ThraP63058 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ThraP63058 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.69■□□□□ 0.58
ThraP63058 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ThraP63058 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ThraP63058 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ThraP63058 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.69■□□□□ 0.58
ThraP63058 Gm13146-201ENSMUST00000118508 780 ntBASIC18.69■□□□□ 0.58
ThraP63058 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ThraP63058 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ThraP63058 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ThraP63058 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ThraP63058 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ThraP63058 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.68■□□□□ 0.58
ThraP63058 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ThraP63058 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ThraP63058 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ThraP63058 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ThraP63058 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
ThraP63058 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms