Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.29■□□□□ 0.52
Lhx1P63006 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lhx1P63006 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lhx1P63006 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lhx1P63006 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Lhx1P63006 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Lhx1P63006 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lhx1P63006 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.28■□□□□ 0.52
Lhx1P63006 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.28■□□□□ 0.52
Lhx1P63006 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lhx1P63006 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.28■□□□□ 0.52
Lhx1P63006 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lhx1P63006 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Lhx1P63006 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lhx1P63006 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lhx1P63006 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lhx1P63006 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lhx1P63006 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lhx1P63006 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.27■□□□□ 0.52
Lhx1P63006 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.27■□□□□ 0.52
Lhx1P63006 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Lhx1P63006 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lhx1P63006 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lhx1P63006 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Lhx1P63006 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lhx1P63006 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.27■□□□□ 0.52
Lhx1P63006 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lhx1P63006 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Lhx1P63006 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lhx1P63006 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lhx1P63006 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lhx1P63006 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lhx1P63006 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lhx1P63006 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Lhx1P63006 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Lhx1P63006 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.26■□□□□ 0.51
Lhx1P63006 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.26■□□□□ 0.51
Lhx1P63006 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Lhx1P63006 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.26■□□□□ 0.51
Lhx1P63006 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Lhx1P63006 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lhx1P63006 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx1P63006 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx1P63006 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.25■□□□□ 0.51
Lhx1P63006 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx1P63006 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx1P63006 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx1P63006 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx1P63006 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.25■□□□□ 0.51
Lhx1P63006 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx1P63006 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Lhx1P63006 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx1P63006 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Lhx1P63006 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx1P63006 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx1P63006 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lhx1P63006 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lhx1P63006 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lhx1P63006 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lhx1P63006 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Lhx1P63006 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.24■□□□□ 0.51
Lhx1P63006 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lhx1P63006 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.24■□□□□ 0.51
Lhx1P63006 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.24■□□□□ 0.51
Lhx1P63006 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.24■□□□□ 0.51
Lhx1P63006 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lhx1P63006 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lhx1P63006 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.24■□□□□ 0.51
Lhx1P63006 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Lhx1P63006 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lhx1P63006 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lhx1P63006 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lhx1P63006 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx1P63006 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.23■□□□□ 0.51
Lhx1P63006 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.23■□□□□ 0.51
Lhx1P63006 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx1P63006 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx1P63006 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx1P63006 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx1P63006 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.23■□□□□ 0.51
Lhx1P63006 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx1P63006 Gm44549-201ENSMUST00000208351 577 ntBASIC18.23■□□□□ 0.51
Lhx1P63006 Gm20049-201ENSMUST00000219950 730 ntBASIC18.23■□□□□ 0.51
Lhx1P63006 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx1P63006 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lhx1P63006 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms