Protein–RNA interactions for Protein: P59114

Pcif1, Phosphorylated CTD-interacting factor 1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1P59114 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Pcif1P59114 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcif1P59114 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcif1P59114 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.88■□□□□ 0.93
Pcif1P59114 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcif1P59114 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcif1P59114 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.88■□□□□ 0.93
Pcif1P59114 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcif1P59114 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcif1P59114 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcif1P59114 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcif1P59114 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcif1P59114 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.87■□□□□ 0.93
Pcif1P59114 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcif1P59114 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcif1P59114 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcif1P59114 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcif1P59114 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.87■□□□□ 0.93
Pcif1P59114 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcif1P59114 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcif1P59114 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pcif1P59114 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pcif1P59114 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcif1P59114 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcif1P59114 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcif1P59114 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pcif1P59114 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcif1P59114 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcif1P59114 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcif1P59114 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcif1P59114 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcif1P59114 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcif1P59114 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.86■□□□□ 0.93
Pcif1P59114 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcif1P59114 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcif1P59114 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcif1P59114 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcif1P59114 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Pcif1P59114 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.86■□□□□ 0.93
Pcif1P59114 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcif1P59114 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.86■□□□□ 0.93
Pcif1P59114 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcif1P59114 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Pcif1P59114 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcif1P59114 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcif1P59114 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcif1P59114 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.85■□□□□ 0.93
Pcif1P59114 Gm5408-201ENSMUST00000197998 747 ntBASIC20.85■□□□□ 0.93
Pcif1P59114 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.85■□□□□ 0.93
Pcif1P59114 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcif1P59114 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Pcif1P59114 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcif1P59114 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcif1P59114 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Pcif1P59114 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcif1P59114 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcif1P59114 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcif1P59114 BC021767-201ENSMUST00000126387 1716 ntBASIC20.84■□□□□ 0.93
Pcif1P59114 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcif1P59114 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Pcif1P59114 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Pcif1P59114 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.84■□□□□ 0.93
Pcif1P59114 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.84■□□□□ 0.93
Pcif1P59114 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcif1P59114 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcif1P59114 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcif1P59114 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcif1P59114 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Pcif1P59114 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcif1P59114 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcif1P59114 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcif1P59114 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcif1P59114 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcif1P59114 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcif1P59114 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pcif1P59114 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcif1P59114 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcif1P59114 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcif1P59114 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcif1P59114 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcif1P59114 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcif1P59114 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcif1P59114 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcif1P59114 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcif1P59114 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcif1P59114 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcif1P59114 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pcif1P59114 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcif1P59114 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcif1P59114 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.82■□□□□ 0.92
Pcif1P59114 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcif1P59114 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcif1P59114 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcif1P59114 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.82■□□□□ 0.92
Pcif1P59114 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcif1P59114 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcif1P59114 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcif1P59114 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcif1P59114 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcif1P59114 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms