Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sssca1P56873 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Sssca1P56873 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sssca1P56873 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.02■□□□□ -0
Sssca1P56873 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Sssca1P56873 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Sssca1P56873 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.02■□□□□ -0
Sssca1P56873 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.02■□□□□ -0
Sssca1P56873 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Sssca1P56873 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sssca1P56873 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sssca1P56873 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sssca1P56873 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sssca1P56873 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sssca1P56873 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sssca1P56873 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.02□□□□□ -0.01
Sssca1P56873 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sssca1P56873 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sssca1P56873 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.01□□□□□ -0.01
Sssca1P56873 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Sssca1P56873 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sssca1P56873 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.01□□□□□ -0.01
Sssca1P56873 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Sssca1P56873 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sssca1P56873 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sssca1P56873 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sssca1P56873 Gm43182-201ENSMUST00000199476 2528 ntBASIC15□□□□□ -0.01
Sssca1P56873 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sssca1P56873 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sssca1P56873 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15□□□□□ -0.01
Sssca1P56873 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sssca1P56873 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15□□□□□ -0.01
Sssca1P56873 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sssca1P56873 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sssca1P56873 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Sssca1P56873 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sssca1P56873 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Sssca1P56873 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sssca1P56873 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sssca1P56873 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sssca1P56873 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sssca1P56873 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.99□□□□□ -0.01
Sssca1P56873 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.99□□□□□ -0.01
Sssca1P56873 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sssca1P56873 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sssca1P56873 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.98□□□□□ -0.01
Sssca1P56873 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Spcs1-204ENSMUST00000226782 949 ntBASIC14.98□□□□□ -0.01
Sssca1P56873 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sssca1P56873 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Sssca1P56873 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sssca1P56873 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sssca1P56873 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sssca1P56873 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms