Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.06■□□□□ 0.48
Cdh5P55284 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.06■□□□□ 0.48
Cdh5P55284 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.06■□□□□ 0.48
Cdh5P55284 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh5P55284 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh5P55284 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cdh5P55284 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh5P55284 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh5P55284 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cdh5P55284 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.05■□□□□ 0.48
Cdh5P55284 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh5P55284 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh5P55284 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh5P55284 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh5P55284 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh5P55284 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh5P55284 Gm10493-201ENSMUST00000097270 612 ntBASIC18.05■□□□□ 0.48
Cdh5P55284 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh5P55284 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh5P55284 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh5P55284 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cdh5P55284 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh5P55284 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh5P55284 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh5P55284 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.04■□□□□ 0.48
Cdh5P55284 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh5P55284 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh5P55284 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh5P55284 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh5P55284 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.04■□□□□ 0.48
Cdh5P55284 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cdh5P55284 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh5P55284 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cdh5P55284 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh5P55284 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
Cdh5P55284 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.04■□□□□ 0.48
Cdh5P55284 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.04■□□□□ 0.48
Cdh5P55284 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.04■□□□□ 0.48
Cdh5P55284 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cdh5P55284 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh5P55284 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh5P55284 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Cdh5P55284 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh5P55284 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh5P55284 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh5P55284 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.03■□□□□ 0.48
Cdh5P55284 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Cdh5P55284 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.03■□□□□ 0.48
Cdh5P55284 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Cdh5P55284 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.03■□□□□ 0.48
Cdh5P55284 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.03■□□□□ 0.48
Cdh5P55284 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.03■□□□□ 0.48
Cdh5P55284 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cdh5P55284 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Cdh5P55284 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cdh5P55284 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh5P55284 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cdh5P55284 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.02■□□□□ 0.48
Cdh5P55284 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.02■□□□□ 0.48
Cdh5P55284 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh5P55284 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.02■□□□□ 0.47
Cdh5P55284 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh5P55284 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.02■□□□□ 0.47
Cdh5P55284 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh5P55284 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh5P55284 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh5P55284 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh5P55284 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh5P55284 Fst-202ENSMUST00000223640 2612 ntBASIC18.01■□□□□ 0.47
Cdh5P55284 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.01■□□□□ 0.47
Cdh5P55284 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh5P55284 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms