Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC23.77■■□□□ 1.4
Msh6P54276 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Msh6P54276 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Msh6P54276 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
Msh6P54276 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Msh6P54276 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
Msh6P54276 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC23.77■■□□□ 1.4
Msh6P54276 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
Msh6P54276 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
Msh6P54276 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Msh6P54276 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Msh6P54276 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.76■■□□□ 1.39
Msh6P54276 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Msh6P54276 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Msh6P54276 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Msh6P54276 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Msh6P54276 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Msh6P54276 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Msh6P54276 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Msh6P54276 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC23.76■■□□□ 1.39
Msh6P54276 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Msh6P54276 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC23.76■■□□□ 1.39
Msh6P54276 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Msh6P54276 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Msh6P54276 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC23.76■■□□□ 1.39
Msh6P54276 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Msh6P54276 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Msh6P54276 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Msh6P54276 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Msh6P54276 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Msh6P54276 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Msh6P54276 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Msh6P54276 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Msh6P54276 Gm15378-201ENSMUST00000121894 207 ntBASIC23.75■■□□□ 1.39
Msh6P54276 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC23.75■■□□□ 1.39
Msh6P54276 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC23.75■■□□□ 1.39
Msh6P54276 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Msh6P54276 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Msh6P54276 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Msh6P54276 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Msh6P54276 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Msh6P54276 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Msh6P54276 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Msh6P54276 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Msh6P54276 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Msh6P54276 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Msh6P54276 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Msh6P54276 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Msh6P54276 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Msh6P54276 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC23.73■■□□□ 1.39
Msh6P54276 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC23.73■■□□□ 1.39
Msh6P54276 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Msh6P54276 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC23.73■■□□□ 1.39
Msh6P54276 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Msh6P54276 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Msh6P54276 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Msh6P54276 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Msh6P54276 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Msh6P54276 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Msh6P54276 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Msh6P54276 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Msh6P54276 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC23.72■■□□□ 1.39
Msh6P54276 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Msh6P54276 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC23.72■■□□□ 1.39
Msh6P54276 AC163280.1-201ENSMUST00000228194 1100 ntBASIC23.72■■□□□ 1.39
Msh6P54276 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Msh6P54276 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
Msh6P54276 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Msh6P54276 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Msh6P54276 H2-K2-201ENSMUST00000174250 1049 ntBASIC23.71■■□□□ 1.39
Msh6P54276 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Msh6P54276 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Msh6P54276 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Msh6P54276 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Msh6P54276 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Msh6P54276 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Msh6P54276 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Msh6P54276 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Msh6P54276 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Msh6P54276 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Msh6P54276 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Msh6P54276 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Msh6P54276 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Msh6P54276 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Msh6P54276 Gm13158-201ENSMUST00000122007 736 ntBASIC23.69■■□□□ 1.38
Msh6P54276 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Msh6P54276 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Msh6P54276 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Msh6P54276 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Msh6P54276 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Msh6P54276 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Msh6P54276 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Msh6P54276 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Msh6P54276 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.68■■□□□ 1.38
Msh6P54276 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Msh6P54276 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC23.68■■□□□ 1.38
Msh6P54276 CT010444.2-201ENSMUST00000217877 1629 ntBASIC23.68■■□□□ 1.38
Msh6P54276 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Msh6P54276 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Msh6P54276 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms