Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Pdx1P52946 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Pdx1P52946 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.43■□□□□ 0.54
Pdx1P52946 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pdx1P52946 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pdx1P52946 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdx1P52946 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pdx1P52946 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pdx1P52946 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdx1P52946 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.42■□□□□ 0.54
Pdx1P52946 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pdx1P52946 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdx1P52946 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.42■□□□□ 0.54
Pdx1P52946 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdx1P52946 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.42■□□□□ 0.54
Pdx1P52946 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.42■□□□□ 0.54
Pdx1P52946 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pdx1P52946 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.42■□□□□ 0.54
Pdx1P52946 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdx1P52946 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdx1P52946 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdx1P52946 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdx1P52946 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdx1P52946 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Pdx1P52946 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdx1P52946 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdx1P52946 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdx1P52946 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdx1P52946 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.41■□□□□ 0.54
Pdx1P52946 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdx1P52946 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pdx1P52946 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pdx1P52946 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdx1P52946 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdx1P52946 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdx1P52946 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdx1P52946 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.41■□□□□ 0.54
Pdx1P52946 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdx1P52946 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdx1P52946 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdx1P52946 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdx1P52946 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pdx1P52946 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pdx1P52946 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdx1P52946 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdx1P52946 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdx1P52946 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pdx1P52946 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.4■□□□□ 0.54
Pdx1P52946 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdx1P52946 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdx1P52946 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdx1P52946 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pdx1P52946 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdx1P52946 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdx1P52946 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pdx1P52946 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.39■□□□□ 0.53
Pdx1P52946 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdx1P52946 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdx1P52946 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pdx1P52946 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pdx1P52946 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pdx1P52946 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.39■□□□□ 0.53
Pdx1P52946 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.39■□□□□ 0.53
Pdx1P52946 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pdx1P52946 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.39■□□□□ 0.53
Pdx1P52946 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdx1P52946 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdx1P52946 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pdx1P52946 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pdx1P52946 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdx1P52946 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdx1P52946 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdx1P52946 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.38■□□□□ 0.53
Pdx1P52946 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.38■□□□□ 0.53
Pdx1P52946 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pdx1P52946 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdx1P52946 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdx1P52946 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdx1P52946 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdx1P52946 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pdx1P52946 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdx1P52946 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdx1P52946 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pdx1P52946 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pdx1P52946 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pdx1P52946 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdx1P52946 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdx1P52946 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdx1P52946 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdx1P52946 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdx1P52946 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdx1P52946 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.37■□□□□ 0.53
Pdx1P52946 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdx1P52946 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdx1P52946 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms