Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nek1P51954 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nek1P51954 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nek1P51954 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nek1P51954 Gm27801-201ENSMUST00000184174 223 ntBASIC20.72■□□□□ 0.91
Nek1P51954 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nek1P51954 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Nek1P51954 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nek1P51954 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nek1P51954 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nek1P51954 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nek1P51954 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nek1P51954 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nek1P51954 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Nek1P51954 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nek1P51954 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Nek1P51954 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Nek1P51954 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.71■□□□□ 0.91
Nek1P51954 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nek1P51954 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Nek1P51954 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.71■□□□□ 0.91
Nek1P51954 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nek1P51954 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nek1P51954 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nek1P51954 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.71■□□□□ 0.91
Nek1P51954 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Nek1P51954 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek1P51954 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek1P51954 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek1P51954 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.7■□□□□ 0.9
Nek1P51954 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek1P51954 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.7■□□□□ 0.9
Nek1P51954 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nek1P51954 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.69■□□□□ 0.9
Nek1P51954 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 AV356131-201ENSMUST00000206201 750 ntBASIC20.69■□□□□ 0.9
Nek1P51954 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nek1P51954 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek1P51954 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Nek1P51954 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nek1P51954 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek1P51954 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.68■□□□□ 0.9
Nek1P51954 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek1P51954 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.68■□□□□ 0.9
Nek1P51954 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.68■□□□□ 0.9
Nek1P51954 Gm27011-201ENSMUST00000182352 972 ntBASIC20.68■□□□□ 0.9
Nek1P51954 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.68■□□□□ 0.9
Nek1P51954 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek1P51954 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek1P51954 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nek1P51954 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek1P51954 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek1P51954 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek1P51954 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Nek1P51954 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nek1P51954 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek1P51954 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.67■□□□□ 0.9
Nek1P51954 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nek1P51954 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.67■□□□□ 0.9
Nek1P51954 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek1P51954 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek1P51954 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek1P51954 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek1P51954 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nek1P51954 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek1P51954 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nek1P51954 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nek1P51954 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.66■□□□□ 0.9
Nek1P51954 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.66■□□□□ 0.9
Nek1P51954 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Nek1P51954 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek1P51954 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek1P51954 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek1P51954 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.65■□□□□ 0.9
Nek1P51954 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nek1P51954 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.65■□□□□ 0.9
Nek1P51954 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nek1P51954 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek1P51954 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.65■□□□□ 0.9
Nek1P51954 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Nek1P51954 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.65■□□□□ 0.9
Nek1P51954 Gm10033-202ENSMUST00000211874 928 ntBASIC20.65■□□□□ 0.9
Nek1P51954 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek1P51954 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek1P51954 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms