Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx3P50481 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx3P50481 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.93■□□□□ 0.62
Lhx3P50481 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Lhx3P50481 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx3P50481 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx3P50481 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Lhx3P50481 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx3P50481 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.93■□□□□ 0.62
Lhx3P50481 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx3P50481 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Lhx3P50481 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx3P50481 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.92■□□□□ 0.62
Lhx3P50481 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx3P50481 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx3P50481 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Lhx3P50481 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.92■□□□□ 0.62
Lhx3P50481 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.92■□□□□ 0.62
Lhx3P50481 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx3P50481 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Lhx3P50481 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Lhx3P50481 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx3P50481 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx3P50481 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx3P50481 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx3P50481 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Lhx3P50481 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx3P50481 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lhx3P50481 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Lhx3P50481 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx3P50481 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx3P50481 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Lhx3P50481 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx3P50481 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.91■□□□□ 0.62
Lhx3P50481 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx3P50481 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx3P50481 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.91■□□□□ 0.62
Lhx3P50481 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx3P50481 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx3P50481 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx3P50481 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx3P50481 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx3P50481 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.9■□□□□ 0.62
Lhx3P50481 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx3P50481 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx3P50481 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx3P50481 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Lhx3P50481 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx3P50481 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.9■□□□□ 0.62
Lhx3P50481 Rab3c-203ENSMUST00000224180 967 ntBASIC18.9■□□□□ 0.62
Lhx3P50481 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lhx3P50481 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx3P50481 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx3P50481 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lhx3P50481 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx3P50481 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Lhx3P50481 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.89■□□□□ 0.62
Lhx3P50481 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx3P50481 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx3P50481 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx3P50481 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.89■□□□□ 0.61
Lhx3P50481 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.89■□□□□ 0.61
Lhx3P50481 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx3P50481 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx3P50481 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Lhx3P50481 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx3P50481 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx3P50481 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Lhx3P50481 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx3P50481 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx3P50481 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.89■□□□□ 0.61
Lhx3P50481 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.89■□□□□ 0.61
Lhx3P50481 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.88■□□□□ 0.61
Lhx3P50481 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx3P50481 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx3P50481 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx3P50481 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx3P50481 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx3P50481 Gm12441-201ENSMUST00000121806 588 ntBASIC18.88■□□□□ 0.61
Lhx3P50481 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx3P50481 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx3P50481 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx3P50481 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx3P50481 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx3P50481 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx3P50481 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx3P50481 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx3P50481 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx3P50481 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.87■□□□□ 0.61
Lhx3P50481 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.87■□□□□ 0.61
Lhx3P50481 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx3P50481 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.87■□□□□ 0.61
Lhx3P50481 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx3P50481 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx3P50481 Iqck-206ENSMUST00000208658 2891 ntBASIC18.87■□□□□ 0.61
Lhx3P50481 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx3P50481 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx3P50481 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lhx3P50481 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.86■□□□□ 0.61
Lhx3P50481 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms