Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SftpbP50405 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SftpbP50405 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.03■□□□□ 0.64
SftpbP50405 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SftpbP50405 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SftpbP50405 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SftpbP50405 Grk6-206ENSMUST00000224995 2971 ntBASIC19.02■□□□□ 0.64
SftpbP50405 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SftpbP50405 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SftpbP50405 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SftpbP50405 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SftpbP50405 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SftpbP50405 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.02■□□□□ 0.64
SftpbP50405 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SftpbP50405 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SftpbP50405 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.02■□□□□ 0.64
SftpbP50405 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SftpbP50405 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SftpbP50405 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SftpbP50405 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SftpbP50405 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SftpbP50405 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SftpbP50405 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SftpbP50405 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SftpbP50405 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SftpbP50405 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SftpbP50405 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SftpbP50405 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SftpbP50405 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SftpbP50405 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SftpbP50405 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SftpbP50405 Gm27801-201ENSMUST00000184174 223 ntBASIC19.01■□□□□ 0.63
SftpbP50405 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.01■□□□□ 0.63
SftpbP50405 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SftpbP50405 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.01■□□□□ 0.63
SftpbP50405 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SftpbP50405 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SftpbP50405 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SftpbP50405 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SftpbP50405 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SftpbP50405 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SftpbP50405 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SftpbP50405 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SftpbP50405 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SftpbP50405 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SftpbP50405 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SftpbP50405 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SftpbP50405 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SftpbP50405 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SftpbP50405 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SftpbP50405 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SftpbP50405 Gm27454-201ENSMUST00000185090 204 ntBASIC18.99■□□□□ 0.63
SftpbP50405 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
SftpbP50405 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SftpbP50405 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SftpbP50405 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SftpbP50405 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SftpbP50405 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.98■□□□□ 0.63
SftpbP50405 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SftpbP50405 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SftpbP50405 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SftpbP50405 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.98■□□□□ 0.63
SftpbP50405 Gm12821-201ENSMUST00000120022 600 ntBASIC18.98■□□□□ 0.63
SftpbP50405 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.98■□□□□ 0.63
SftpbP50405 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.98■□□□□ 0.63
SftpbP50405 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SftpbP50405 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SftpbP50405 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SftpbP50405 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SftpbP50405 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SftpbP50405 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SftpbP50405 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.98■□□□□ 0.63
SftpbP50405 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SftpbP50405 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SftpbP50405 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.97■□□□□ 0.63
SftpbP50405 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.97■□□□□ 0.63
SftpbP50405 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.97■□□□□ 0.63
SftpbP50405 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.97■□□□□ 0.63
SftpbP50405 Gm40848-201ENSMUST00000221998 324 ntBASIC18.97■□□□□ 0.63
SftpbP50405 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SftpbP50405 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SftpbP50405 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SftpbP50405 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.97■□□□□ 0.63
SftpbP50405 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SftpbP50405 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms