Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sox18P43680 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.83■□□□□ 0.44
Sox18P43680 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox18P43680 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox18P43680 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox18P43680 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sox18P43680 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sox18P43680 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sox18P43680 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox18P43680 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox18P43680 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox18P43680 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox18P43680 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.82■□□□□ 0.44
Sox18P43680 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Sox18P43680 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox18P43680 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.82■□□□□ 0.44
Sox18P43680 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sox18P43680 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.82■□□□□ 0.44
Sox18P43680 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sox18P43680 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sox18P43680 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox18P43680 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox18P43680 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox18P43680 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox18P43680 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox18P43680 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox18P43680 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.81■□□□□ 0.44
Sox18P43680 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.81■□□□□ 0.44
Sox18P43680 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.81■□□□□ 0.44
Sox18P43680 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Sox18P43680 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox18P43680 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.81■□□□□ 0.44
Sox18P43680 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox18P43680 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sox18P43680 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.8■□□□□ 0.44
Sox18P43680 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sox18P43680 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sox18P43680 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox18P43680 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox18P43680 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox18P43680 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox18P43680 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sox18P43680 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sox18P43680 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox18P43680 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox18P43680 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sox18P43680 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox18P43680 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sox18P43680 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Sox18P43680 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox18P43680 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox18P43680 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox18P43680 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Sox18P43680 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox18P43680 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox18P43680 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Sox18P43680 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.79■□□□□ 0.44
Sox18P43680 Gm6659-201ENSMUST00000174752 547 ntBASIC17.79■□□□□ 0.44
Sox18P43680 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Sox18P43680 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sox18P43680 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox18P43680 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox18P43680 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox18P43680 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox18P43680 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox18P43680 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sox18P43680 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox18P43680 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sox18P43680 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.78■□□□□ 0.44
Sox18P43680 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.78■□□□□ 0.44
Sox18P43680 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.78■□□□□ 0.44
Sox18P43680 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox18P43680 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sox18P43680 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sox18P43680 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox18P43680 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox18P43680 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sox18P43680 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sox18P43680 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.77■□□□□ 0.44
Sox18P43680 Gm10517-202ENSMUST00000192970 758 ntBASIC17.77■□□□□ 0.44
Sox18P43680 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox18P43680 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox18P43680 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox18P43680 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox18P43680 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.77■□□□□ 0.44
Sox18P43680 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Sox18P43680 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Sox18P43680 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sox18P43680 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Sox18P43680 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sox18P43680 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox18P43680 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Sox18P43680 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sox18P43680 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox18P43680 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox18P43680 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox18P43680 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox18P43680 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.76■□□□□ 0.43
Sox18P43680 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sox18P43680 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms