Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd9P40240 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd9P40240 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd9P40240 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd9P40240 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd9P40240 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd9P40240 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd9P40240 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd9P40240 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.4■□□□□ 0.54
Cd9P40240 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd9P40240 Gm10849-201ENSMUST00000100397 618 ntBASIC18.4■□□□□ 0.54
Cd9P40240 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd9P40240 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.4■□□□□ 0.54
Cd9P40240 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
Cd9P40240 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd9P40240 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd9P40240 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd9P40240 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd9P40240 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd9P40240 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.4■□□□□ 0.54
Cd9P40240 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cd9P40240 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cd9P40240 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd9P40240 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd9P40240 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd9P40240 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd9P40240 Gm18671-201ENSMUST00000214826 683 ntBASIC18.39■□□□□ 0.53
Cd9P40240 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.39■□□□□ 0.53
Cd9P40240 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd9P40240 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cd9P40240 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd9P40240 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd9P40240 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Cd9P40240 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd9P40240 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cd9P40240 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd9P40240 Gm6420-201ENSMUST00000193885 723 ntBASIC18.38■□□□□ 0.53
Cd9P40240 Gm7514-201ENSMUST00000209475 934 ntBASIC18.38■□□□□ 0.53
Cd9P40240 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd9P40240 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cd9P40240 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd9P40240 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd9P40240 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cd9P40240 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd9P40240 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd9P40240 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd9P40240 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Cd9P40240 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd9P40240 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd9P40240 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd9P40240 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd9P40240 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd9P40240 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd9P40240 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cd9P40240 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cd9P40240 AV356131-201ENSMUST00000206201 750 ntBASIC18.37■□□□□ 0.53
Cd9P40240 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd9P40240 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cd9P40240 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd9P40240 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd9P40240 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cd9P40240 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.37■□□□□ 0.53
Cd9P40240 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cd9P40240 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cd9P40240 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd9P40240 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Cd9P40240 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd9P40240 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cd9P40240 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.36■□□□□ 0.53
Cd9P40240 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.36■□□□□ 0.53
Cd9P40240 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd9P40240 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd9P40240 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd9P40240 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd9P40240 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd9P40240 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd9P40240 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd9P40240 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd9P40240 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.35■□□□□ 0.53
Cd9P40240 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cd9P40240 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.35■□□□□ 0.53
Cd9P40240 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.35■□□□□ 0.53
Cd9P40240 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cd9P40240 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd9P40240 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd9P40240 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd9P40240 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.34■□□□□ 0.53
Cd9P40240 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd9P40240 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd9P40240 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd9P40240 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cd9P40240 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cd9P40240 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cd9P40240 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.34■□□□□ 0.53
Cd9P40240 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Cd9P40240 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd9P40240 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd9P40240 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.34■□□□□ 0.53
Cd9P40240 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd9P40240 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms