Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HmgclP38060 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.37■□□□□ 0.53
HmgclP38060 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HmgclP38060 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HmgclP38060 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HmgclP38060 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HmgclP38060 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HmgclP38060 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HmgclP38060 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HmgclP38060 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HmgclP38060 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HmgclP38060 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HmgclP38060 Nespas-201ENSMUST00000143738 1083 ntBASIC18.36■□□□□ 0.53
HmgclP38060 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HmgclP38060 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HmgclP38060 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HmgclP38060 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HmgclP38060 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HmgclP38060 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HmgclP38060 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HmgclP38060 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.35■□□□□ 0.53
HmgclP38060 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HmgclP38060 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HmgclP38060 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HmgclP38060 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HmgclP38060 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HmgclP38060 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HmgclP38060 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.34■□□□□ 0.53
HmgclP38060 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.34■□□□□ 0.53
HmgclP38060 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HmgclP38060 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HmgclP38060 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HmgclP38060 Gm42569-201ENSMUST00000200539 472 ntBASIC18.34■□□□□ 0.53
HmgclP38060 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.34■□□□□ 0.53
HmgclP38060 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
HmgclP38060 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HmgclP38060 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HmgclP38060 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HmgclP38060 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HmgclP38060 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
HmgclP38060 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HmgclP38060 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HmgclP38060 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HmgclP38060 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HmgclP38060 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HmgclP38060 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HmgclP38060 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HmgclP38060 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HmgclP38060 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HmgclP38060 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.33■□□□□ 0.52
HmgclP38060 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
HmgclP38060 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HmgclP38060 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HmgclP38060 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.32■□□□□ 0.52
HmgclP38060 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.32■□□□□ 0.52
HmgclP38060 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HmgclP38060 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.32■□□□□ 0.52
HmgclP38060 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HmgclP38060 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.32■□□□□ 0.52
HmgclP38060 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HmgclP38060 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HmgclP38060 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HmgclP38060 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HmgclP38060 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HmgclP38060 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HmgclP38060 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HmgclP38060 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HmgclP38060 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HmgclP38060 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HmgclP38060 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.3■□□□□ 0.52
HmgclP38060 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HmgclP38060 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HmgclP38060 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HmgclP38060 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HmgclP38060 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HmgclP38060 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HmgclP38060 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HmgclP38060 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HmgclP38060 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.3■□□□□ 0.52
HmgclP38060 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HmgclP38060 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HmgclP38060 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HmgclP38060 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HmgclP38060 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HmgclP38060 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HmgclP38060 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HmgclP38060 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.29■□□□□ 0.52
HmgclP38060 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HmgclP38060 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HmgclP38060 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HmgclP38060 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HmgclP38060 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HmgclP38060 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HmgclP38060 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HmgclP38060 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HmgclP38060 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.28■□□□□ 0.52
HmgclP38060 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HmgclP38060 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.28■□□□□ 0.52
HmgclP38060 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HmgclP38060 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms